RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
CAB39-206ENST00000493540 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
CAB39-206ENST00000493540 CRAMP1Q96RY5 1269 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
CAB39-206ENST00000493540 NYXQ9GZU5 481 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 CENPFP49454 3210 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
CAB39-206ENST00000493540 PAPPA2Q9BXP8 1791 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 VEGFBP49765 207 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
CAB39-206ENST00000493540 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 ADGRD1Q6QNK2 874 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 TTLL7Q6ZT98 887 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 BABAM1Q9NWV8 329 aa9.3□□□□□ -0.92
CAB39-206ENST00000493540 MKRN1Q9UHC7 482 aaKnown RBP9.3□□□□□ -0.92
CAB39-206ENST00000493540 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
CAB39-206ENST00000493540 SMAPO00193 183 aa9.29□□□□□ -0.92
CAB39-206ENST00000493540 SLC10A5Q5PT55 438 aa9.29□□□□□ -0.92
CAB39-206ENST00000493540 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
CAB39-206ENST00000493540 VPS33BQ9H267 617 aa9.29□□□□□ -0.92
CAB39-206ENST00000493540 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
CAB39-206ENST00000493540 BRCA2P51587 3418 aa9.29□□□□□ -0.92
CAB39-206ENST00000493540 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
CAB39-206ENST00000493540 CLCN1P35523 988 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 SUSD4Q5VX71 490 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 NPM2Q86SE8 214 aaKnown RBP9.28□□□□□ -0.92
CAB39-206ENST00000493540 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 SYNE4Q8N205 404 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 OTOFQ9HC10 1997 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 ABCC4O15439 1325 aa9.28□□□□□ -0.92
CAB39-206ENST00000493540 DNAJB2P25686 324 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
CAB39-206ENST00000493540 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
CAB39-206ENST00000493540 PARP10Q53GL7 1025 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 MAP1SQ66K74 1059 aaPredicted RBP9.27□□□□□ -0.93
CAB39-206ENST00000493540 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 HHIPL1Q96JK4 782 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 DDX21Q9NR30 783 aaKnown RBP eCLIP9.27□□□□□ -0.93
CAB39-206ENST00000493540 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.93
CAB39-206ENST00000493540 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 NPHP1O15259 732 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 PROSER3Q2NL68 480 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 CST9Q5W186 159 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 USP50Q70EL3 339 aaPredicted RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 THUMPD2Q9BTF0 503 aaKnown RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 ZBTB3Q9H5J0 574 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 GPRC5DQ9NZD1 345 aa9.26□□□□□ -0.93
CAB39-206ENST00000493540 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
CAB39-206ENST00000493540 HRO43593 1189 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 EPS15P42566 896 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 KIAA2012Q0VF49 1180 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
CAB39-206ENST00000493540 NLRP7Q8WX94 980 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 TLL2Q9Y6L7 1015 aa9.25□□□□□ -0.93
CAB39-206ENST00000493540 GPTP24298 496 aa9.24□□□□□ -0.93
CAB39-206ENST00000493540 EAPPQ56P03 285 aaPredicted RBP9.24□□□□□ -0.93
CAB39-206ENST00000493540 NLRP10Q86W26 655 aa9.24□□□□□ -0.93
CAB39-206ENST00000493540 JDP2Q8WYK2 163 aa9.24□□□□□ -0.93
CAB39-206ENST00000493540 RPGRQ92834 1020 aaKnown RBP9.24□□□□□ -0.93
CAB39-206ENST00000493540 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
CAB39-206ENST00000493540 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
CAB39-206ENST00000493540 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 YDJCA8MPS7 323 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 HOXB7P09629 217 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
CAB39-206ENST00000493540 FMR1Q06787 632 aaKnown RBP eCLIP9.23□□□□□ -0.93
CAB39-206ENST00000493540 CXCL9Q07325 125 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 AOC3Q16853 763 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 DEFB115Q30KQ5 88 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 PPP1R42Q7Z4L9 355 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 SAPCD2Q86UD0 394 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 RBM17Q96I25 401 aaKnown RBP9.23□□□□□ -0.93
CAB39-206ENST00000493540 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
CAB39-206ENST00000493540 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
CAB39-206ENST00000493540 MYH13Q9UKX3 1938 aa9.23□□□□□ -0.93
CAB39-206ENST00000493540 CHL1O00533 1208 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 MYL6BP14649 208 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 TMPOP42166 694 aaKnown RBP9.22□□□□□ -0.93
CAB39-206ENST00000493540 RGS19P49795 217 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 LBX1P52954 281 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 EIF6P56537 245 aaKnown RBP9.22□□□□□ -0.93
CAB39-206ENST00000493540 SP8Q8IXZ3 490 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 LARGE2Q8N3Y3 721 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 CAPNS2Q96L46 248 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 ZNRF3Q9ULT6 936 aa9.22□□□□□ -0.93
CAB39-206ENST00000493540 RRP7AQ9Y3A4 280 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms