RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 PICALMQ13492 652 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
BRAT1-206ENST00000493232 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 IMPG2Q9BZV3 1241 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
BRAT1-206ENST00000493232 TUBB4AP04350 444 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
BRAT1-206ENST00000493232 SELENOOQ9BVL4 669 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 SPDYE3A6NKU9 549 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 F8W031 263 aaPredicted RBP18.55■□□□□ 0.56
BRAT1-206ENST00000493232 CCDC155Q8N6L0 562 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 EYA3Q99504 573 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 CNPY2Q9Y2B0 182 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
BRAT1-206ENST00000493232 RNF187Q5TA31 235 aaPredicted RBP18.54■□□□□ 0.56
BRAT1-206ENST00000493232 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 RTCBQ9Y3I0 505 aaKnown RBP18.54■□□□□ 0.56
BRAT1-206ENST00000493232 FBLN1P23142 703 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 LMAN1P49257 510 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
BRAT1-206ENST00000493232 ANO6Q4KMQ2 910 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 PPM1FP49593 454 aaPredicted RBP18.54■□□□□ 0.56
BRAT1-206ENST00000493232 NPATQ14207 1427 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 SPTLC2O15270 562 aa18.54■□□□□ 0.56
BRAT1-206ENST00000493232 POLR3GO15318 223 aaPredicted RBP18.54■□□□□ 0.56
BRAT1-206ENST00000493232 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
BRAT1-206ENST00000493232 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-206ENST00000493232 RASAL2Q9UJF2 1139 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 HSF2BPO75031 334 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 KRT2P35908 639 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 BICDL2A1A5D9 508 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 GNA11P29992 359 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 TRPM2O94759 1503 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 FERP16591 822 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 LMBR1Q8WVP7 490 aa18.53■□□□□ 0.56
BRAT1-206ENST00000493232 SREK1Q8WXA9 508 aaKnown RBP18.53■□□□□ 0.56
BRAT1-206ENST00000493232 NAP1L4Q99733 375 aaKnown RBP18.53■□□□□ 0.56
BRAT1-206ENST00000493232 USP48Q86UV5 1035 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 GIMAP7Q8NHV1 300 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 RTL1A6NKG5 1358 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 TACC1O75410 805 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 PPM1EQ8WY54 764 aa18.52■□□□□ 0.56
BRAT1-206ENST00000493232 CTAGE15A4D2H0 777 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 CTAGE8P0CG41 777 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 CBX1P83916 185 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 BRAPQ7Z569 592 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 CTAGE6Q86UF2 777 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 CTAGE4Q8IX94 777 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 ASXL2Q76L83 1435 aa18.52■□□□□ 0.55
BRAT1-206ENST00000493232 MCM9Q9NXL9 1143 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 PARP3Q9Y6F1 533 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 DACT1Q9NYF0 836 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 PARD3Q8TEW0 1356 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 PA2G4Q9UQ80 394 aaKnown RBP18.51■□□□□ 0.55
BRAT1-206ENST00000493232 KRT83P78385 493 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 CEP85Q6P2H3 762 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 SSX2IPQ9Y2D8 614 aa18.51■□□□□ 0.55
BRAT1-206ENST00000493232 MARCKSP29966 332 aaPredicted RBP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 NCBP1Q09161 790 aaKnown RBP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 SKILP12757 684 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 DHX58Q96C10 678 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 C6orf163Q5TEZ5 329 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 PPP1R14CQ8TAE6 165 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 FAM13AO94988 1023 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 LDHBP07195 334 aaKnown RBP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 ABCC1P33527 1531 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 GRIPAP1Q4V328 841 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
BRAT1-206ENST00000493232 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
BRAT1-206ENST00000493232 AOPEPQ8N6M6 819 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 C8orf37Q96NL8 207 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 CCDC77Q9BR77 488 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 MRVI1Q9Y6F6 885 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
BRAT1-206ENST00000493232 CREB3L3Q68CJ9 461 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 VAMP4O75379 141 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 TNNI2P48788 182 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 TCHPQ9BT92 498 aa18.49■□□□□ 0.55
BRAT1-206ENST00000493232 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 KIF4AO95239 1232 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 POLD1P28340 1107 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 SRRTQ9BXP5 876 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms