RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 TRPM4Q8TD43 1214 aa17.52■□□□□ 0.4
MMP11-213ENST00000493132 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.4
MMP11-213ENST00000493132 H7C1D1 291 aa17.51■□□□□ 0.39
MMP11-213ENST00000493132 METTL24Q5JXM2 366 aa17.51■□□□□ 0.39
MMP11-213ENST00000493132 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
MMP11-213ENST00000493132 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
MMP11-213ENST00000493132 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 RPS12P25398 132 aaKnown RBP17.5■□□□□ 0.39
MMP11-213ENST00000493132 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 PODNQ7Z5L7 613 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 COA1Q9GZY4 146 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 TRPM7Q96QT4 1865 aa17.5■□□□□ 0.39
MMP11-213ENST00000493132 GNAI3P08754 354 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 VIL1P09327 827 aaKnown RBP17.49■□□□□ 0.39
MMP11-213ENST00000493132 TBC1D10BQ4KMP7 808 aaPredicted RBP17.49■□□□□ 0.39
MMP11-213ENST00000493132 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
MMP11-213ENST00000493132 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
MMP11-213ENST00000493132 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 SIL1Q9H173 461 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 MYH13Q9UKX3 1938 aa17.49■□□□□ 0.39
MMP11-213ENST00000493132 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
MMP11-213ENST00000493132 SAMD7Q7Z3H4 446 aa17.48■□□□□ 0.39
MMP11-213ENST00000493132 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
MMP11-213ENST00000493132 DPF2Q92785 391 aa17.48■□□□□ 0.39
MMP11-213ENST00000493132 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
MMP11-213ENST00000493132 ARAP2Q8WZ64 1704 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 ZNF609O15014 1411 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
MMP11-213ENST00000493132 EGFRP00533 1210 aa17.46■□□□□ 0.39
MMP11-213ENST00000493132 GTF2IP78347 998 aa17.46■□□□□ 0.39
MMP11-213ENST00000493132 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
MMP11-213ENST00000493132 CD209Q9NNX6 404 aa17.46■□□□□ 0.39
MMP11-213ENST00000493132 JAG2Q9Y219 1238 aa17.46■□□□□ 0.39
MMP11-213ENST00000493132 TRAF5O00463 557 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 GYG1P46976 350 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 RFX5P48382 616 aaPredicted RBP17.45■□□□□ 0.38
MMP11-213ENST00000493132 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
MMP11-213ENST00000493132 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
MMP11-213ENST00000493132 PASKQ96RG2 1323 aa17.45■□□□□ 0.38
MMP11-213ENST00000493132 EYA2O00167 538 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
MMP11-213ENST00000493132 GNAI2P04899 355 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 USP17L8P0C7I0 530 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 RLBP1P12271 317 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 PTPN12Q05209 780 aaKnown RBP17.44■□□□□ 0.38
MMP11-213ENST00000493132 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
MMP11-213ENST00000493132 STRIP1Q5VSL9 837 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 TTLL5Q6EMB2 1281 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
MMP11-213ENST00000493132 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
MMP11-213ENST00000493132 MYO3BQ8WXR4 1341 aa17.44■□□□□ 0.38
MMP11-213ENST00000493132 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 VPS37DQ86XT2 251 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 PANK1Q8TE04 598 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
MMP11-213ENST00000493132 PDE8BO95263 885 aa17.42■□□□□ 0.38
MMP11-213ENST00000493132 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
MMP11-213ENST00000493132 KIAA0825Q8IV33 1275 aa17.42■□□□□ 0.38
MMP11-213ENST00000493132 GMLQ99445 158 aa17.42■□□□□ 0.38
MMP11-213ENST00000493132 CREBZFQ9NS37 354 aa17.42■□□□□ 0.38
MMP11-213ENST00000493132 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
MMP11-213ENST00000493132 IQSEC3Q9UPP2 1182 aaPredicted RBP17.42■□□□□ 0.38
MMP11-213ENST00000493132 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
MMP11-213ENST00000493132 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
MMP11-213ENST00000493132 ZNF280AP59817 542 aaPredicted RBP17.41■□□□□ 0.38
MMP11-213ENST00000493132 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
MMP11-213ENST00000493132 ZNF408Q9H9D4 720 aa17.41■□□□□ 0.38
MMP11-213ENST00000493132 MYOZ2Q9NPC6 264 aa17.41■□□□□ 0.38
MMP11-213ENST00000493132 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
MMP11-213ENST00000493132 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
MMP11-213ENST00000493132 F8W031 263 aaPredicted RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 SLC5A1P13866 664 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 IL1R1P14778 569 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 CHAF1AQ13111 956 aaPredicted RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 KLRG1Q96E93 195 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
MMP11-213ENST00000493132 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
MMP11-213ENST00000493132 ADM5C9JUS6 153 aa17.39■□□□□ 0.37
MMP11-213ENST00000493132 CIAO1O76071 339 aa17.39■□□□□ 0.37
MMP11-213ENST00000493132 SASH1O94885 1247 aa17.39■□□□□ 0.37
MMP11-213ENST00000493132 KRT26Q7Z3Y9 468 aa17.39■□□□□ 0.37
MMP11-213ENST00000493132 USP48Q86UV5 1035 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms