RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
COL12A1-209ENST00000493109 IRAK1P51617 712 aa10.72□□□□□ -0.69
COL12A1-209ENST00000493109 ELOAQ14241 798 aaKnown RBP10.72□□□□□ -0.69
COL12A1-209ENST00000493109 CEP120Q8N960 986 aa10.72□□□□□ -0.69
COL12A1-209ENST00000493109 GPR152Q8TDT2 470 aa10.72□□□□□ -0.69
COL12A1-209ENST00000493109 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
COL12A1-209ENST00000493109 CEP41Q9BYV8 373 aa10.72□□□□□ -0.69
COL12A1-209ENST00000493109 SMNDC1O75940 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
COL12A1-209ENST00000493109 UVSSAQ2YD98 709 aa10.71□□□□□ -0.69
COL12A1-209ENST00000493109 KLHDC7BQ96G42 594 aa10.71□□□□□ -0.69
COL12A1-209ENST00000493109 PBX4Q9BYU1 374 aa10.71□□□□□ -0.69
COL12A1-209ENST00000493109 PAX4O43316 350 aa10.7□□□□□ -0.7
COL12A1-209ENST00000493109 TAL1P17542 331 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-209ENST00000493109 SCNN1AP37088 669 aa10.7□□□□□ -0.7
COL12A1-209ENST00000493109 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
COL12A1-209ENST00000493109 RNF43Q68DV7 783 aa10.7□□□□□ -0.7
COL12A1-209ENST00000493109 POP1Q99575 1024 aaKnown RBP10.7□□□□□ -0.7
COL12A1-209ENST00000493109 ABI2Q9NYB9 513 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-209ENST00000493109 DUOXA2Q1HG44 320 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 TTC39BQ5VTQ0 682 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-209ENST00000493109 KLHL23Q8NBE8 558 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 SPACA7Q96KW9 195 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 ADAM19Q9H013 955 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 SLAIN2Q9P270 581 aa10.69□□□□□ -0.7
COL12A1-209ENST00000493109 ACPPP15309 386 aa10.68□□□□□ -0.7
COL12A1-209ENST00000493109 DTX1Q86Y01 620 aa10.68□□□□□ -0.7
COL12A1-209ENST00000493109 DBNDD2Q9BQY9 259 aa10.68□□□□□ -0.7
COL12A1-209ENST00000493109 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
COL12A1-209ENST00000493109 FAM20CQ8IXL6 584 aa10.67□□□□□ -0.7
COL12A1-209ENST00000493109 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
COL12A1-209ENST00000493109 PREPP48147 710 aa10.66□□□□□ -0.7
COL12A1-209ENST00000493109 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-209ENST00000493109 ZMYND15Q9H091 742 aa10.66□□□□□ -0.7
COL12A1-209ENST00000493109 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
COL12A1-209ENST00000493109 STIM2Q9P246 746 aa10.66□□□□□ -0.7
COL12A1-209ENST00000493109 KANSL3Q9P2N6 904 aa10.66□□□□□ -0.7
COL12A1-209ENST00000493109 NFKBIEO00221 500 aa10.65□□□□□ -0.7
COL12A1-209ENST00000493109 TMEM164Q5U3C3 297 aa10.65□□□□□ -0.7
COL12A1-209ENST00000493109 SEC31BQ9NQW1 1179 aa10.65□□□□□ -0.7
COL12A1-209ENST00000493109 FNDC3AQ9Y2H6 1198 aaKnown RBP10.65□□□□□ -0.7
COL12A1-209ENST00000493109 PTPRAP18433 802 aa10.64□□□□□ -0.71
COL12A1-209ENST00000493109 NCAPG2Q86XI2 1143 aa10.64□□□□□ -0.71
COL12A1-209ENST00000493109 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
COL12A1-209ENST00000493109 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
COL12A1-209ENST00000493109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-209ENST00000493109 H3BRJ5 948 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 TXKP42681 527 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 HGSNATQ68CP4 663 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 INTS5Q6P9B9 1019 aaKnown RBP10.63□□□□□ -0.71
COL12A1-209ENST00000493109 ATCAYQ86WG3 371 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 CLEC10AQ8IUN9 316 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 ELP3Q9H9T3 547 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 SALL4Q9UJQ4 1053 aa10.63□□□□□ -0.71
COL12A1-209ENST00000493109 BMP3P12645 472 aa10.62□□□□□ -0.71
COL12A1-209ENST00000493109 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
COL12A1-209ENST00000493109 NUDT16Q96DE0 195 aaKnown RBP10.62□□□□□ -0.71
COL12A1-209ENST00000493109 TRPA1O75762 1119 aa10.61□□□□□ -0.71
COL12A1-209ENST00000493109 HOXA10P31260 410 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-209ENST00000493109 BEND4Q6ZU67 534 aa10.61□□□□□ -0.71
COL12A1-209ENST00000493109 GRIK1P39086 918 aa10.6□□□□□ -0.71
COL12A1-209ENST00000493109 NLRP12P59046 1061 aa10.6□□□□□ -0.71
COL12A1-209ENST00000493109 PIP4K2BP78356 416 aa10.6□□□□□ -0.71
COL12A1-209ENST00000493109 PDE12Q6L8Q7 609 aaKnown RBP10.6□□□□□ -0.71
COL12A1-209ENST00000493109 CLP1Q92989 425 aaKnown RBP10.6□□□□□ -0.71
COL12A1-209ENST00000493109 SEPT3Q9UH03 358 aa10.6□□□□□ -0.71
COL12A1-209ENST00000493109 ATG7O95352 703 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 ANKRD34AQ69YU3 496 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 C1orf127Q8N9H9 656 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 WNT8BQ93098 351 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 DZANK1Q9NVP4 752 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
COL12A1-209ENST00000493109 RNF208Q9H0X6 261 aa10.58□□□□□ -0.72
COL12A1-209ENST00000493109 KCNF1Q9H3M0 494 aa10.58□□□□□ -0.72
COL12A1-209ENST00000493109 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
COL12A1-209ENST00000493109 SOX13Q9UN79 622 aa10.58□□□□□ -0.72
COL12A1-209ENST00000493109 RNF114Q9Y508 228 aa10.58□□□□□ -0.72
COL12A1-209ENST00000493109 A6NHS1 94 aa10.57□□□□□ -0.72
COL12A1-209ENST00000493109 ZNF438Q7Z4V0 828 aa10.57□□□□□ -0.72
COL12A1-209ENST00000493109 CHRDQ9H2X0 955 aa10.57□□□□□ -0.72
COL12A1-209ENST00000493109 SHISA5Q8N114 240 aa10.56□□□□□ -0.72
COL12A1-209ENST00000493109 RUSC1Q9BVN2 902 aa10.56□□□□□ -0.72
COL12A1-209ENST00000493109 GGNBP2Q9H3C7 697 aa10.56□□□□□ -0.72
COL12A1-209ENST00000493109 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 SART1O43290 800 aaKnown RBP10.55□□□□□ -0.72
COL12A1-209ENST00000493109 WNT11O96014 354 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 SGO2Q562F6 1265 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 XKR5Q6UX68 686 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 SLC7A3Q8WY07 619 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 MFSD14AQ96MC6 490 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 HIF3AQ9Y2N7 669 aa10.55□□□□□ -0.72
COL12A1-209ENST00000493109 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
COL12A1-209ENST00000493109 PDE2AO00408 941 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-209ENST00000493109 YBX3P16989 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL12A1-209ENST00000493109 CABP4P57796 275 aa10.53□□□□□ -0.72
COL12A1-209ENST00000493109 EDEM1Q92611 657 aa10.53□□□□□ -0.72
COL12A1-209ENST00000493109 MEGF11A6BM72 1044 aa10.52□□□□□ -0.73
COL12A1-209ENST00000493109 DLGAP3O95886 979 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms