RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
GPNMB-214ENST00000492858 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
GPNMB-214ENST00000492858 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
GPNMB-214ENST00000492858 CD99L2Q8TCZ2 262 aa15.71■□□□□ 0.11
GPNMB-214ENST00000492858 ARMC5Q96C12 935 aa15.71■□□□□ 0.11
GPNMB-214ENST00000492858 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.11
GPNMB-214ENST00000492858 PSME4Q14997 1843 aa15.71■□□□□ 0.1
GPNMB-214ENST00000492858 RANBP2P49792 3224 aaKnown RBP15.7■□□□□ 0.1
GPNMB-214ENST00000492858 KIAA0100Q14667 2235 aaKnown RBP15.7■□□□□ 0.1
GPNMB-214ENST00000492858 HSP90B1P14625 803 aaKnown RBP15.7■□□□□ 0.1
GPNMB-214ENST00000492858 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
GPNMB-214ENST00000492858 APOBEC3FQ8IUX4 373 aaKnown RBP15.7■□□□□ 0.1
GPNMB-214ENST00000492858 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
GPNMB-214ENST00000492858 SLC10A4Q96EP9 437 aa15.7■□□□□ 0.1
GPNMB-214ENST00000492858 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
GPNMB-214ENST00000492858 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-214ENST00000492858 FZD1Q9UP38 647 aa15.7■□□□□ 0.1
GPNMB-214ENST00000492858 WTIPA6NIX2 430 aaPredicted RBP15.69■□□□□ 0.1
GPNMB-214ENST00000492858 IGF2BP3O00425 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
GPNMB-214ENST00000492858 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
GPNMB-214ENST00000492858 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
GPNMB-214ENST00000492858 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
GPNMB-214ENST00000492858 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
GPNMB-214ENST00000492858 WNK4Q96J92 1243 aa15.68■□□□□ 0.1
GPNMB-214ENST00000492858 TMEM106CQ9BVX2 250 aa15.68■□□□□ 0.1
GPNMB-214ENST00000492858 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
GPNMB-214ENST00000492858 RBBP6Q7Z6E9 1792 aaKnown RBP15.67■□□□□ 0.1
GPNMB-214ENST00000492858 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 CHL1O00533 1208 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 PDE8AO60658 829 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 ZBTB48P10074 688 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-214ENST00000492858 CRHR2Q13324 411 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 STRIP1Q5VSL9 837 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 JARID2Q92833 1246 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-214ENST00000492858 CLMNQ96JQ2 1002 aa15.67■□□□□ 0.1
GPNMB-214ENST00000492858 PPP1R12BO60237 982 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-214ENST00000492858 PCCAP05165 728 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-214ENST00000492858 HOXB7P09629 217 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 MMP14P50281 582 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 CAP1Q01518 475 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 SP3Q02447 781 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 ZNF333Q96JL9 665 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 MYD88Q99836 296 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 DEFB129Q9H1M3 183 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 TRIOBPQ9H2D6 2365 aa15.65■□□□□ 0.1
GPNMB-214ENST00000492858 COL6A3P12111 3177 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 H0YGN5 161 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 MAP3K11Q16584 847 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 OTUD7BQ6GQQ9 843 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 CCDC191Q8NCU4 936 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
GPNMB-214ENST00000492858 CDC5LQ99459 802 aaKnown RBP15.64■□□□□ 0.09
GPNMB-214ENST00000492858 COA1Q9GZY4 146 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
GPNMB-214ENST00000492858 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
GPNMB-214ENST00000492858 CEP290O15078 2479 aa15.63■□□□□ 0.09
GPNMB-214ENST00000492858 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
GPNMB-214ENST00000492858 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
GPNMB-214ENST00000492858 SLC9C1Q4G0N8 1177 aa15.63■□□□□ 0.09
GPNMB-214ENST00000492858 OTUD5Q96G74 571 aa15.63■□□□□ 0.09
GPNMB-214ENST00000492858 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
GPNMB-214ENST00000492858 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
GPNMB-214ENST00000492858 GJA5P36382 358 aa15.62■□□□□ 0.09
GPNMB-214ENST00000492858 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
GPNMB-214ENST00000492858 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
GPNMB-214ENST00000492858 TXNRD3Q86VQ6 643 aa15.62■□□□□ 0.09
GPNMB-214ENST00000492858 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-214ENST00000492858 MYCP01106 439 aaPredicted RBP15.61■□□□□ 0.09
GPNMB-214ENST00000492858 CTSWP56202 376 aa15.61■□□□□ 0.09
GPNMB-214ENST00000492858 DLGAP5Q15398 846 aa15.61■□□□□ 0.09
GPNMB-214ENST00000492858 PTPN18Q99952 460 aa15.61■□□□□ 0.09
GPNMB-214ENST00000492858 PHAXQ9H814 394 aaKnown RBP15.61■□□□□ 0.09
GPNMB-214ENST00000492858 PTCH2Q9Y6C5 1203 aa15.61■□□□□ 0.09
GPNMB-214ENST00000492858 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
GPNMB-214ENST00000492858 DLL1O00548 723 aa15.6■□□□□ 0.09
GPNMB-214ENST00000492858 GTF2IP78347 998 aa15.6■□□□□ 0.09
GPNMB-214ENST00000492858 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
GPNMB-214ENST00000492858 PPP2R3BQ9Y5P8 575 aa15.6■□□□□ 0.09
GPNMB-214ENST00000492858 UNCXA6NJT0 531 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 KLRK1P26718 216 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 IREB2P48200 963 aaKnown RBP15.59■□□□□ 0.09
GPNMB-214ENST00000492858 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 SUPT20HL1Q3ZLR7 823 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 GREM2Q9H772 168 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
GPNMB-214ENST00000492858 CLRN2A0PK11 232 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
GPNMB-214ENST00000492858 NBPF12Q5TAG4 269 aaPredicted RBP15.58■□□□□ 0.08
GPNMB-214ENST00000492858 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 SLC17A8Q8NDX2 589 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 TTLL11Q8NHH1 800 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 PCDHAC2Q9Y5I4 1007 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 ZNF804BA4D1E1 1349 aa15.58■□□□□ 0.08
GPNMB-214ENST00000492858 ANKRD13AQ8IZ07 590 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms