RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 ITGA6P23229 1130 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 NAP1L2Q9ULW6 460 aaPredicted RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 NOL7Q9UMY1 257 aaKnown RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 EXOC5O00471 708 aa15.21■□□□□ 0.02
PRAME-213ENST00000492657 HAND2P61296 217 aa15.21■□□□□ 0.02
PRAME-213ENST00000492657 KRT85P78386 507 aa15.21■□□□□ 0.02
PRAME-213ENST00000492657 METTL24Q5JXM2 366 aa15.21■□□□□ 0.02
PRAME-213ENST00000492657 LDHAL6AQ6ZMR3 332 aa15.21■□□□□ 0.02
PRAME-213ENST00000492657 NCOA5Q9HCD5 579 aaKnown RBP15.21■□□□□ 0.02
PRAME-213ENST00000492657 FOXP2O15409 715 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 LIG1P18858 919 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 EXOSC10Q01780 885 aaKnown RBP15.2■□□□□ 0.02
PRAME-213ENST00000492657 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 TRMT112Q9UI30 125 aaKnown RBP15.2■□□□□ 0.02
PRAME-213ENST00000492657 AKAP2Q9Y2D5 859 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
PRAME-213ENST00000492657 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
PRAME-213ENST00000492657 BCL9O00512 1426 aa15.2■□□□□ 0.02
PRAME-213ENST00000492657 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
PRAME-213ENST00000492657 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
PRAME-213ENST00000492657 PUS7LQ9H0K6 701 aaKnown RBP15.19■□□□□ 0.02
PRAME-213ENST00000492657 CSPP1Q1MSJ5 1256 aa15.19■□□□□ 0.02
PRAME-213ENST00000492657 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.19■□□□□ 0.02
PRAME-213ENST00000492657 DISP2A7MBM2 1401 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 HELBQ8NG08 1087 aaPredicted RBP15.18■□□□□ 0.02
PRAME-213ENST00000492657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRAME-213ENST00000492657 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 RIC1Q4ADV7 1423 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 PFKFB2O60825 505 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 CTSWP56202 376 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 CAMK4Q16566 473 aa15.18■□□□□ 0.02
PRAME-213ENST00000492657 PTMAP06454 111 aaKnown RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 MCAMP43121 646 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 DZIP3Q86Y13 1208 aaKnown RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 SPATA32Q96LK8 384 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 HMGB1P09429 215 aaKnown RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 RESTQ13127 1097 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 LEO1Q8WVC0 666 aaPredicted RBP15.17■□□□□ 0.02
PRAME-213ENST00000492657 FUCA2Q9BTY2 467 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 ZKSCAN5Q9Y2L8 839 aa15.17■□□□□ 0.02
PRAME-213ENST00000492657 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 H3BQV1 296 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 SNAP23O00161 211 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 FGAP02671 866 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 CEBPZQ03701 1054 aaKnown RBP15.16■□□□□ 0.02
PRAME-213ENST00000492657 IFFO2Q5TF58 517 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
PRAME-213ENST00000492657 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 ACSBG1Q96GR2 724 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 CDHR2Q9BYE9 1310 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 LETM1O95202 739 aaPredicted RBP15.16■□□□□ 0.02
PRAME-213ENST00000492657 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 PGBD1Q96JS3 809 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 CCDC39Q9UFE4 941 aa15.16■□□□□ 0.02
PRAME-213ENST00000492657 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
PRAME-213ENST00000492657 ZNF500O60304 480 aaPredicted RBP15.15■□□□□ 0.02
PRAME-213ENST00000492657 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
PRAME-213ENST00000492657 FTOQ9C0B1 505 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRAME-213ENST00000492657 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
PRAME-213ENST00000492657 NUP98P52948 1817 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 PHKA1P46020 1223 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 CKAP2LQ8IYA6 745 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 VGLL2Q8N8G2 317 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 SCAND2PQ9GZW5 306 aaPredicted RBP15.14■□□□□ 0.01
PRAME-213ENST00000492657 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
PRAME-213ENST00000492657 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 ELP1O95163 1332 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
PRAME-213ENST00000492657 GPAA1O43292 621 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
PRAME-213ENST00000492657 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 APPBP2Q92624 585 aa15.14■□□□□ 0.01
PRAME-213ENST00000492657 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 PDE8AO60658 829 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 NWD2Q9ULI1 1742 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 LRP6O75581 1613 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 AP5Z1O43299 807 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 ADCY5O95622 1261 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 ZFYP08048 801 aaPredicted RBP15.13■□□□□ 0.01
PRAME-213ENST00000492657 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
PRAME-213ENST00000492657 PDE8BO95263 885 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 IL6STP40189 918 aaPredicted RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms