RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-206	ENST00000492233	USP17L2	Q6R6M4	530 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MCM10	Q7L590	875 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	USP17L1	Q7RTZ2	530 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PCGF5	Q86SE9	256 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PLEKHM2	Q8IWE5	1019 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	HSCB	Q8IWL3	235 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	RGL4	Q8IZJ4	473 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NGDN	Q8NEJ9	315 aa	Known RBP	4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CABLES1	Q8TDN4	633 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	EYA1	Q99502	592 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	EPAS1	Q99814	870 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	IER2	Q9BTL4	223 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CDHR5	Q9HBB8	845 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CHMP5	Q9NZZ3	219 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	VTI1B	Q9UEU0	232 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	TPX2	Q9ULW0	747 aa	Known RBP	4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	USP54	Q70EL1	1684 aa		4.56	□□□□□ -1.68
ATPAF1-206	ENST00000492233	RIMS1	Q86UR5	1692 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	SORBS3	O60504	671 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	KCNA6	P17658	529 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	HOXC9	P31274	260 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MAN1A1	P33908	653 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MCM4	P33991	863 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	AMPH	P49418	695 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CCT4	P50991	539 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CTDSPL2	Q05D32	466 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	BRD3	Q15059	726 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	L1TD1	Q5T7N2	865 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	TTC22	Q5TAA0	569 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	ICE2	Q659A1	982 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	METTL3	Q86U44	580 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PLPP6	Q8IY26	295 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PNMA1	Q8ND90	353 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	C1orf131	Q8NDD1	294 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	RTF1	Q92541	710 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	KIF2C	Q99661	725 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	INO80B	Q9C086	356 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	ZHX3	Q9H4I2	956 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	TYW1	Q9NV66	732 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PARP2	Q9UGN5	583 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MKRN1	Q9UHC7	482 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	TSPYL4	Q9UJ04	414 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	SCIN	Q9Y6U3	715 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NWD1	Q149M9	1564 aa		4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PIK3C2A	O00443	1686 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MSH6	P52701	1360 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	DLG5	Q8TDM6	1919 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	LRRC37A3	O60309	1634 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PIK3CD	O00329	1044 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NPHP1	O15259	732 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	FOXO3	O43524	673 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	C21orf2	O43822	256 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NRDC	O43847	1150 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CAND2	O75155	1236 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	HMMR	O75330	724 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	FOS	P01100	380 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	VIL1	P09327	827 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	POTEI	P0CG38	1075 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	GSPT1	P15170	499 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PDE6B	P35913	854 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CHMP4BP1	P59074	171 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	FOXK1	P85037	733 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	POU5F1	Q01860	360 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	POU5F1B	Q06416	359 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PTK7	Q13308	1070 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	GLIPR1L2	Q4G1C9	344 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PLEKHG4	Q58EX7	1191 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	SYCP2L	Q5T4T6	812 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CASC1	Q6TDU7	716 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	GET4	Q7L5D6	327 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MCF2L2	Q86YR7	1114 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	IFNL1	Q8IU54	200 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	ANKMY2	Q8IV38	441 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CKAP2L	Q8IYA6	745 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	DEPDC4	Q8N2C3	294 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	C1orf216	Q8TAB5	229 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PPM1E	Q8WY54	764 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.54	□□□□□ -1.68	5e-6	■■■■□ 24.5
ATPAF1-206	ENST00000492233	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	RNPC3	Q96LT9	517 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	CEP63	Q96MT8	703 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	NEUROD6	Q96NK8	337 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	DCBLD2	Q96PD2	775 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MEIS3	Q99687	375 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	APBA2	Q99767	749 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	ARPC5L	Q9BPX5	153 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	OSBPL3	Q9H4L5	887 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	FRMD4B	Q9Y2L6	1034 aa		4.54	□□□□□ -1.68
ATPAF1-206	ENST00000492233	MAP3K5	Q99683	1374 aa		4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	SALL3	Q9BXA9	1300 aa		4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	FMN2	Q9NZ56	1722 aa		4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	GNAT3	A8MTJ3	354 aa		4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	USP17L5	A8MUK1	530 aa		4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	IFRD1	O00458	451 aa	Predicted RBP	4.53	□□□□□ -1.68
ATPAF1-206	ENST00000492233	PRMT3	O60678	531 aa		4.53	□□□□□ -1.68

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