RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
VTA1-204ENST00000491881 UTP4Q969X6 686 aaKnown RBP7.06□□□□□ -1.28
VTA1-204ENST00000491881 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 LACRTQ9GZZ8 138 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 WISP1O95388 367 aa7.05□□□□□ -1.28
VTA1-204ENST00000491881 UVSSAQ2YD98 709 aa7.05□□□□□ -1.28
VTA1-204ENST00000491881 CEP135Q66GS9 1140 aa7.05□□□□□ -1.28
VTA1-204ENST00000491881 INTS5Q6P9B9 1019 aaKnown RBP7.05□□□□□ -1.28
VTA1-204ENST00000491881 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
VTA1-204ENST00000491881 RNF114Q9Y508 228 aa7.05□□□□□ -1.28
VTA1-204ENST00000491881 SMNDC1O75940 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
VTA1-204ENST00000491881 BRD2P25440 801 aaKnown RBP7.04□□□□□ -1.28
VTA1-204ENST00000491881 CDC27P30260 824 aa7.04□□□□□ -1.28
VTA1-204ENST00000491881 CDC25BP30305 580 aa7.04□□□□□ -1.28
VTA1-204ENST00000491881 TRIP4Q15650 581 aaPredicted RBP7.04□□□□□ -1.28
VTA1-204ENST00000491881 ETFBKMTQ8IXQ9 262 aa7.04□□□□□ -1.28
VTA1-204ENST00000491881 OR13H1Q8NG92 308 aa7.04□□□□□ -1.28
VTA1-204ENST00000491881 C7orf69Q9H7B7 122 aa7.04□□□□□ -1.28
VTA1-204ENST00000491881 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 SCNN1AP37088 669 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 ATP11AP98196 1134 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 HYAL2Q12891 473 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 TRIM26Q12899 539 aaPredicted RBP7.03□□□□□ -1.28
VTA1-204ENST00000491881 FAM117BQ6P1L5 589 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 TRIM42Q8IWZ5 723 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 DBNDD2Q9BQY9 259 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 CARD10Q9BWT7 1032 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 KCNK4Q9NYG8 393 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 IVNS1ABPQ9Y6Y0 642 aa7.03□□□□□ -1.28
VTA1-204ENST00000491881 HMX2A2RU54 273 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 SPINK2P20155 84 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 DUOXA2Q1HG44 320 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
VTA1-204ENST00000491881 RNF43Q68DV7 783 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 KLHL23Q8NBE8 558 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 PIK3R5Q8WYR1 880 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 COL26A1Q96A83 441 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 FAM13BQ9NYF5 915 aa7.02□□□□□ -1.29
VTA1-204ENST00000491881 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 FSCN2O14926 492 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 ADAMTS4O75173 837 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 ABL1P00519 1130 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 NAA30Q147X3 362 aaPredicted RBP7.01□□□□□ -1.29
VTA1-204ENST00000491881 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
VTA1-204ENST00000491881 C16orf46Q6P387 395 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 KIAA1211Q6ZU35 1233 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 TXNDC2Q86VQ3 553 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 FAM46AQ96IP4 442 aaKnown RBP7.01□□□□□ -1.29
VTA1-204ENST00000491881 MYRFLQ96LU7 910 aa7.01□□□□□ -1.29
VTA1-204ENST00000491881 GNEQ9Y223 722 aaKnown RBP7.01□□□□□ -1.29
VTA1-204ENST00000491881 SART1O43290 800 aaKnown RBP7□□□□□ -1.29
VTA1-204ENST00000491881 WNT11O96014 354 aa7□□□□□ -1.29
VTA1-204ENST00000491881 SERPINB4P48594 390 aa7□□□□□ -1.29
VTA1-204ENST00000491881 DTX1Q86Y01 620 aa7□□□□□ -1.29
VTA1-204ENST00000491881 SAP130Q9H0E3 1048 aa7□□□□□ -1.29
VTA1-204ENST00000491881 RASSF4Q9H2L5 321 aa7□□□□□ -1.29
VTA1-204ENST00000491881 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
VTA1-204ENST00000491881 SEPT3Q9UH03 358 aa7□□□□□ -1.29
VTA1-204ENST00000491881 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
VTA1-204ENST00000491881 PRR19A6NJB7 356 aa6.99□□□□□ -1.29
VTA1-204ENST00000491881 CAPN12Q6ZSI9 719 aa6.99□□□□□ -1.29
VTA1-204ENST00000491881 CLEC10AQ8IUN9 316 aa6.99□□□□□ -1.29
VTA1-204ENST00000491881 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
VTA1-204ENST00000491881 GTF3C2Q8WUA4 911 aaPredicted RBP6.99□□□□□ -1.29
VTA1-204ENST00000491881 TM4SF5O14894 197 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 DDX3YO15523 660 aaKnown RBP6.98□□□□□ -1.29
VTA1-204ENST00000491881 PTPRAP18433 802 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 EPHA1P21709 976 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
VTA1-204ENST00000491881 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 UBASH3BQ8TF42 649 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 FAM83CQ9BQN1 747 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 PBX4Q9BYU1 374 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 GZF1Q9H116 711 aaPredicted RBP6.98□□□□□ -1.29
VTA1-204ENST00000491881 SEC31BQ9NQW1 1179 aa6.98□□□□□ -1.29
VTA1-204ENST00000491881 SH2B1Q9NRF2 756 aaPredicted RBP6.98□□□□□ -1.29
VTA1-204ENST00000491881 BMP3P12645 472 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 ZAP70P43403 619 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 FAM26DQ5JW98 314 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 ADAMTSL4Q6UY14 1074 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 BEND4Q6ZU67 534 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 NCAPG2Q86XI2 1143 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 FOXD4L4Q8WXT5 416 aaPredicted RBP6.97□□□□□ -1.29
VTA1-204ENST00000491881 KLHDC7BQ96G42 594 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 ANO2Q9NQ90 1003 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
VTA1-204ENST00000491881 EGFL7Q9UHF1 273 aa6.97□□□□□ -1.29
VTA1-204ENST00000491881 H3BRB1 525 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 ADAM11O75078 769 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 KIF4AO95239 1232 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 ANKRD34AQ69YU3 496 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
VTA1-204ENST00000491881 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 GPR152Q8TDT2 470 aa6.96□□□□□ -1.3
VTA1-204ENST00000491881 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
VTA1-204ENST00000491881 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 PREPP48147 710 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 CABP4P57796 275 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms