RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DDX3YO15523 660 aaKnown RBP8.83□□□□□ -1
PHC3-213ENST00000491258 COBLO75128 1261 aa8.83□□□□□ -1
PHC3-213ENST00000491258 PTPRAP18433 802 aa8.83□□□□□ -1
PHC3-213ENST00000491258 NUDT16Q96DE0 195 aaKnown RBP8.83□□□□□ -1
PHC3-213ENST00000491258 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
PHC3-213ENST00000491258 MED26O95402 600 aa8.82□□□□□ -1
PHC3-213ENST00000491258 SRPK2P78362 688 aaKnown RBP8.82□□□□□ -1
PHC3-213ENST00000491258 UVSSAQ2YD98 709 aa8.82□□□□□ -1
PHC3-213ENST00000491258 KIAA1211Q6ZU35 1233 aa8.82□□□□□ -1
PHC3-213ENST00000491258 CEP120Q8N960 986 aa8.82□□□□□ -1
PHC3-213ENST00000491258 UBASH3BQ8TF42 649 aa8.82□□□□□ -1
PHC3-213ENST00000491258 CLP1Q92989 425 aaKnown RBP8.82□□□□□ -1
PHC3-213ENST00000491258 ELP3Q9H9T3 547 aa8.82□□□□□ -1
PHC3-213ENST00000491258 TMEM63CQ9P1W3 806 aa8.82□□□□□ -1
PHC3-213ENST00000491258 ZNF438Q7Z4V0 828 aa8.81□□□□□ -1
PHC3-213ENST00000491258 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
PHC3-213ENST00000491258 FAM46AQ96IP4 442 aaKnown RBP8.81□□□□□ -1
PHC3-213ENST00000491258 POP1Q99575 1024 aaKnown RBP8.81□□□□□ -1
PHC3-213ENST00000491258 C7orf69Q9H7B7 122 aa8.81□□□□□ -1
PHC3-213ENST00000491258 SEC31BQ9NQW1 1179 aa8.81□□□□□ -1
PHC3-213ENST00000491258 TM4SF5O14894 197 aa8.8□□□□□ -1
PHC3-213ENST00000491258 ADAM11O75078 769 aa8.8□□□□□ -1
PHC3-213ENST00000491258 CABP4P57796 275 aa8.8□□□□□ -1
PHC3-213ENST00000491258 NFIAQ12857 509 aa8.8□□□□□ -1
PHC3-213ENST00000491258 PDE12Q6L8Q7 609 aaKnown RBP8.8□□□□□ -1
PHC3-213ENST00000491258 ATCAYQ86WG3 371 aa8.8□□□□□ -1
PHC3-213ENST00000491258 TRIM42Q8IWZ5 723 aa8.8□□□□□ -1
PHC3-213ENST00000491258 KLHDC7BQ96G42 594 aa8.8□□□□□ -1
PHC3-213ENST00000491258 SEPT3Q9UH03 358 aa8.8□□□□□ -1
PHC3-213ENST00000491258 SART1O43290 800 aaKnown RBP8.79□□□□□ -1
PHC3-213ENST00000491258 ZDHHC13Q8IUH4 622 aa8.79□□□□□ -1
PHC3-213ENST00000491258 MYRFLQ96LU7 910 aa8.79□□□□□ -1
PHC3-213ENST00000491258 ADAM19Q9H013 955 aa8.79□□□□□ -1
PHC3-213ENST00000491258 CNTN3Q9P232 1028 aa8.79□□□□□ -1
PHC3-213ENST00000491258 HMX2A2RU54 273 aa8.78□□□□□ -1
PHC3-213ENST00000491258 KIAA1324LA8MWY0 1029 aaPredicted RBP8.78□□□□□ -1
PHC3-213ENST00000491258 H3BRJ5 948 aa8.78□□□□□ -1
PHC3-213ENST00000491258 ACPPP15309 386 aa8.78□□□□□ -1
PHC3-213ENST00000491258 ATP2B4P23634 1241 aa8.78□□□□□ -1
PHC3-213ENST00000491258 IRAK1P51617 712 aa8.78□□□□□ -1
PHC3-213ENST00000491258 SLAIN2Q9P270 581 aa8.78□□□□□ -1
PHC3-213ENST00000491258 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1
PHC3-213ENST00000491258 GRIK1P39086 918 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 NLRP12P59046 1061 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 RNF43Q68DV7 783 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 EDEM1Q92611 657 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 DBNDD2Q9BQY9 259 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 KCNF1Q9H3M0 494 aa8.77□□□□□ -1.01
PHC3-213ENST00000491258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
PHC3-213ENST00000491258 PAX4O43316 350 aa8.76□□□□□ -1.01
PHC3-213ENST00000491258 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
PHC3-213ENST00000491258 CES1P23141 567 aa8.76□□□□□ -1.01
PHC3-213ENST00000491258 GP2P55259 537 aaKnown RBP8.76□□□□□ -1.01
PHC3-213ENST00000491258 PIP4K2BP78356 416 aa8.76□□□□□ -1.01
PHC3-213ENST00000491258 DNM1Q05193 864 aaKnown RBP8.76□□□□□ -1.01
PHC3-213ENST00000491258 C1orf127Q8N9H9 656 aa8.76□□□□□ -1.01
PHC3-213ENST00000491258 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
PHC3-213ENST00000491258 OAS3Q9Y6K5 1087 aaKnown RBP8.76□□□□□ -1.01
PHC3-213ENST00000491258 BMP3P12645 472 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 PCSK2P16519 638 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 ANKRD34AQ69YU3 496 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
PHC3-213ENST00000491258 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 TTC16Q8NEE8 873 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 WNT8BQ93098 351 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 PBXIP1Q96AQ6 731 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 KRTAP4-7Q9BYR0 210 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
PHC3-213ENST00000491258 A6NHS1 94 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 PDE2AO00408 941 aaPredicted RBP8.74□□□□□ -1.01
PHC3-213ENST00000491258 TRPA1O75762 1119 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 PREPP48147 710 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 C8orf34Q49A92 452 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 FDX2Q6P4F2 183 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
PHC3-213ENST00000491258 BEND4Q6ZU67 534 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 RUSC1Q9BVN2 902 aa8.74□□□□□ -1.01
PHC3-213ENST00000491258 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
PHC3-213ENST00000491258 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
PHC3-213ENST00000491258 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
PHC3-213ENST00000491258 DZANK1Q9NVP4 752 aa8.73□□□□□ -1.01
PHC3-213ENST00000491258 NFKBIEO00221 500 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
PHC3-213ENST00000491258 PDGFAP04085 211 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 SPINK2P20155 84 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 ARL4DP49703 201 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 LCE1DQ5T752 114 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 XKR5Q6UX68 686 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 CCDC97Q96F63 343 aaPredicted RBP8.72□□□□□ -1.01
PHC3-213ENST00000491258 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
PHC3-213ENST00000491258 PRR19A6NJB7 356 aa8.71□□□□□ -1.02
PHC3-213ENST00000491258 TAL1P17542 331 aaPredicted RBP8.71□□□□□ -1.02
PHC3-213ENST00000491258 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
PHC3-213ENST00000491258 ADAMTS4O75173 837 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms