RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 SPA17Q15506 151 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 RABEP2Q9H5N1 569 aa12.9□□□□□ -0.34
CRNKL1-204ENST00000490910 MTX1Q13505 466 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 A0A087WWV3 80 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 EIF3CLB5ME19 914 aaKnown RBP12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 ZNF202O95125 648 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 IL13P35225 146 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 EIF3CQ99613 913 aaKnown RBP12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 FCHSD1Q86WN1 690 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
CRNKL1-204ENST00000490910 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 ST5P78524 1137 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 KANK3Q6NY19 840 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 WASF1Q92558 559 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.354e-8■■□□□ 12.8
CRNKL1-204ENST00000490910 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 GUCA1BQ9UMX6 200 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 ANKRD65E5RJM6 399 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 PA2G4Q9UQ80 394 aaKnown RBP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 PSME1Q06323 249 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 CD109Q6YHK3 1445 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
CRNKL1-204ENST00000490910 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 ATP2C2O75185 946 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 TEX2Q8IWB9 1127 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
CRNKL1-204ENST00000490910 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 AP5Z1O43299 807 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 NAA25Q14CX7 972 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 A6NNZ2 444 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 ARHGAP25P42331 645 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 ADKP55263 362 aaKnown RBP12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 CCT5P48643 541 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 OSBPL5Q9H0X9 879 aaPredicted RBP12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 LAMC1P11047 1609 aa12.86□□□□□ -0.35
CRNKL1-204ENST00000490910 GOLGA6BA6NDN3 693 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 TTC14Q96N46 770 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 BCCIPQ9P287 314 aaKnown RBP eCLIP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 MYO1BO43795 1136 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 STX10O60499 249 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 ANXA1P04083 346 aa12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 CLNS1AP54105 237 aaKnown RBP12.85□□□□□ -0.35
CRNKL1-204ENST00000490910 CCZ1BP86790 482 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms