RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
HDAC9-225ENST00000490851 ST18O60284 1047 aa12.12□□□□□ -0.47
HDAC9-225ENST00000490851 PDE8BO95263 885 aa12.12□□□□□ -0.47
HDAC9-225ENST00000490851 IGHMBP2P38935 993 aaKnown RBP12.12□□□□□ -0.47
HDAC9-225ENST00000490851 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
HDAC9-225ENST00000490851 ZNF622Q969S3 477 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC9-225ENST00000490851 HSPA4P34932 840 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
HDAC9-225ENST00000490851 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 COL4A1P02462 1669 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 TAF1P21675 1872 aa12.11□□□□□ -0.47
HDAC9-225ENST00000490851 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 ZNF830Q96NB3 372 aaPredicted RBP12.1□□□□□ -0.47
HDAC9-225ENST00000490851 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 MROH5Q6ZUA9 1318 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 C4AP0C0L4 1744 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 RXRBP28702 533 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 ZAP70P43403 619 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
HDAC9-225ENST00000490851 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
HDAC9-225ENST00000490851 RBM8AQ9Y5S9 174 aaKnown RBP12.1□□□□□ -0.47
HDAC9-225ENST00000490851 LAMB2P55268 1798 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 APBA3O96018 575 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 CPA1P15085 419 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 PHKA1P46020 1223 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 CDC5LQ99459 802 aaKnown RBP12.09□□□□□ -0.47
HDAC9-225ENST00000490851 MCAMP43121 646 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 ANAPC15P60006 121 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 NFIXQ14938 502 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 PROM2Q8N271 834 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
HDAC9-225ENST00000490851 LRP5O75197 1615 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
HDAC9-225ENST00000490851 CHRNDQ07001 517 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 LPIN2Q92539 896 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
HDAC9-225ENST00000490851 PRDM16Q9HAZ2 1276 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 WTIPA6NIX2 430 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-225ENST00000490851 SLC5A1P13866 664 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 NFKBIBQ15653 356 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-225ENST00000490851 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
HDAC9-225ENST00000490851 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
HDAC9-225ENST00000490851 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
HDAC9-225ENST00000490851 WASHC4Q2M389 1173 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-225ENST00000490851 FGFR2P21802 821 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
HDAC9-225ENST00000490851 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 CREB3L3Q68CJ9 461 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
HDAC9-225ENST00000490851 TMEM51Q9NW97 253 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
HDAC9-225ENST00000490851 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-225ENST00000490851 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 CASZ1Q86V15 1759 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
HDAC9-225ENST00000490851 GYS1P13807 737 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC9-225ENST00000490851 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 SLC27A2O14975 620 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 RGL2O15211 777 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
HDAC9-225ENST00000490851 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-225ENST00000490851 ADRA2BP18089 450 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 BCAMP50895 628 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
HDAC9-225ENST00000490851 COL24A1Q17RW2 1714 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 M0R2C6 588 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
HDAC9-225ENST00000490851 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-225ENST00000490851 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 SLC51AQ86UW1 340 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 MAST3O60307 1309 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 SSFA2P28290 1259 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 ZMYM1Q5SVZ6 1142 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
HDAC9-225ENST00000490851 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
HDAC9-225ENST00000490851 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
HDAC9-225ENST00000490851 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-225ENST00000490851 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-225ENST00000490851 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms