RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 USP17L1Q7RTZ2 530 aa19.14■□□□□ 0.65
COL27A1-206ENST00000490831 KLRK1P26718 216 aa19.13■□□□□ 0.65
COL27A1-206ENST00000490831 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
COL27A1-206ENST00000490831 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
COL27A1-206ENST00000490831 ZNF646O15015 1829 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-206ENST00000490831 TMEM88BA6NKF7 163 aa19.12■□□□□ 0.65
COL27A1-206ENST00000490831 TAF5LO75529 589 aa19.12■□□□□ 0.65
COL27A1-206ENST00000490831 KCNJ4P48050 445 aa19.12■□□□□ 0.65
COL27A1-206ENST00000490831 ZNF280AP59817 542 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-206ENST00000490831 INTS3Q68E01 1043 aaKnown RBP19.12■□□□□ 0.65
COL27A1-206ENST00000490831 HELBQ8NG08 1087 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-206ENST00000490831 CNNM1Q9NRU3 951 aa19.12■□□□□ 0.65
COL27A1-206ENST00000490831 RIPOR2Q9Y4F9 1068 aa19.12■□□□□ 0.65
COL27A1-206ENST00000490831 SNAP23O00161 211 aa19.11■□□□□ 0.65
COL27A1-206ENST00000490831 STRIP1Q5VSL9 837 aa19.11■□□□□ 0.65
COL27A1-206ENST00000490831 SAMD7Q7Z3H4 446 aa19.11■□□□□ 0.65
COL27A1-206ENST00000490831 IPO8O15397 1037 aaKnown RBP19.1■□□□□ 0.65
COL27A1-206ENST00000490831 EGFRP00533 1210 aa19.1■□□□□ 0.65
COL27A1-206ENST00000490831 DACT2Q5SW24 774 aa19.1■□□□□ 0.65
COL27A1-206ENST00000490831 PUS3Q9BZE2 481 aaKnown RBP19.1■□□□□ 0.65
COL27A1-206ENST00000490831 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
COL27A1-206ENST00000490831 MYO3BQ8WXR4 1341 aa19.09■□□□□ 0.65
COL27A1-206ENST00000490831 BCAR3O75815 825 aa19.09■□□□□ 0.65
COL27A1-206ENST00000490831 UBTFL1P0CB47 393 aaPredicted RBP19.09■□□□□ 0.65
COL27A1-206ENST00000490831 UBE4AQ14139 1066 aa19.09■□□□□ 0.65
COL27A1-206ENST00000490831 CD209Q9NNX6 404 aa19.09■□□□□ 0.65
COL27A1-206ENST00000490831 TRIM27P14373 513 aa19.08■□□□□ 0.64
COL27A1-206ENST00000490831 RFX5P48382 616 aaPredicted RBP19.08■□□□□ 0.64
COL27A1-206ENST00000490831 MMP14P50281 582 aa19.08■□□□□ 0.64
COL27A1-206ENST00000490831 KIF4BQ2VIQ3 1234 aa19.08■□□□□ 0.64
COL27A1-206ENST00000490831 TBC1D10BQ4KMP7 808 aaPredicted RBP19.08■□□□□ 0.64
COL27A1-206ENST00000490831 ATF7IPQ6VMQ6 1270 aa19.08■□□□□ 0.64
COL27A1-206ENST00000490831 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.64
COL27A1-206ENST00000490831 CNTNAP1P78357 1384 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 TRAF5O00463 557 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 USP17L8P0C7I0 530 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 IL1R1P14778 569 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 TTLL5Q6EMB2 1281 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 ZNF804AQ7Z570 1209 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 TRPM7Q96QT4 1865 aa19.07■□□□□ 0.64
COL27A1-206ENST00000490831 FMR1Q06787 632 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL27A1-206ENST00000490831 LRRC24Q50LG9 513 aa19.06■□□□□ 0.64
COL27A1-206ENST00000490831 CST9Q5W186 159 aa19.06■□□□□ 0.64
COL27A1-206ENST00000490831 VGLL2Q8N8G2 317 aa19.06■□□□□ 0.64
COL27A1-206ENST00000490831 MEIS3Q99687 375 aa19.06■□□□□ 0.64
COL27A1-206ENST00000490831 GLIS2Q9BZE0 524 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-206ENST00000490831 PCNTO95613 3336 aa19.05■□□□□ 0.64
COL27A1-206ENST00000490831 RASSF10A6NK89 507 aa19.05■□□□□ 0.64
COL27A1-206ENST00000490831 PLIN1O60240 522 aa19.05■□□□□ 0.64
COL27A1-206ENST00000490831 PTPN12Q05209 780 aaKnown RBP19.05■□□□□ 0.64
COL27A1-206ENST00000490831 MYOZ2Q9NPC6 264 aa19.05■□□□□ 0.64
COL27A1-206ENST00000490831 GTF2IP78347 998 aa19.04■□□□□ 0.64
COL27A1-206ENST00000490831 RBM26Q5T8P6 1007 aaKnown RBP19.04■□□□□ 0.64
COL27A1-206ENST00000490831 KLHDC4Q8TBB5 520 aa19.04■□□□□ 0.64
COL27A1-206ENST00000490831 FRAT1Q92837 279 aaPredicted RBP19.04■□□□□ 0.64
COL27A1-206ENST00000490831 MXD3Q9BW11 206 aa19.04■□□□□ 0.64
COL27A1-206ENST00000490831 FBXO3Q9UK99 471 aa19.04■□□□□ 0.64
COL27A1-206ENST00000490831 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
COL27A1-206ENST00000490831 EYA2O00167 538 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 PDE8BO95263 885 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 GNAI3P08754 354 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 FKBP1AP62942 108 aaKnown RBP19.03■□□□□ 0.64
COL27A1-206ENST00000490831 METTL24Q5JXM2 366 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 FAM84BQ96KN1 310 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-206ENST00000490831 MKRN1Q9UHC7 482 aaKnown RBP19.03■□□□□ 0.64
COL27A1-206ENST00000490831 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
COL27A1-206ENST00000490831 KRT26Q7Z3Y9 468 aa19.02■□□□□ 0.64
COL27A1-206ENST00000490831 OGFOD1Q8N543 542 aa19.02■□□□□ 0.64
COL27A1-206ENST00000490831 TDRD7Q8NHU6 1098 aaKnown RBP19.02■□□□□ 0.64
COL27A1-206ENST00000490831 FBXW7Q969H0 707 aa19.02■□□□□ 0.64
COL27A1-206ENST00000490831 DCPSQ96C86 337 aaKnown RBP19.02■□□□□ 0.64
COL27A1-206ENST00000490831 POLR2AP24928 1970 aaKnown RBP19.02■□□□□ 0.64
COL27A1-206ENST00000490831 FAM205AQ6ZU69 1335 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 PITPNM2Q9BZ72 1349 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 CIAO1O76071 339 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 SASH1O94885 1247 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 FGFR2P21802 821 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 MTX1Q13505 466 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 SCARF1Q14162 830 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 ATG9AQ7Z3C6 839 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 FBXO33Q7Z6M2 555 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 USP48Q86UV5 1035 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 CERS5Q8N5B7 392 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 GGA3Q9NZ52 723 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 TLL2Q9Y6L7 1015 aa19.01■□□□□ 0.63
COL27A1-206ENST00000490831 ASTN2O75129 1339 aaPredicted RBP19■□□□□ 0.63
COL27A1-206ENST00000490831 CELF2O95319 508 aaKnown RBP19■□□□□ 0.63
COL27A1-206ENST00000490831 HIBADHP31937 336 aaKnown RBP19■□□□□ 0.63
COL27A1-206ENST00000490831 GYG1P46976 350 aa19■□□□□ 0.63
COL27A1-206ENST00000490831 DEFB115Q30KQ5 88 aa19■□□□□ 0.63
COL27A1-206ENST00000490831 ZBED3Q96IU2 234 aaPredicted RBP19■□□□□ 0.63
COL27A1-206ENST00000490831 VEGFBP49765 207 aa18.99■□□□□ 0.63
COL27A1-206ENST00000490831 PUM3Q15397 648 aaKnown RBP18.99■□□□□ 0.63
COL27A1-206ENST00000490831 CLUAP1Q96AJ1 413 aa18.99■□□□□ 0.63
COL27A1-206ENST00000490831 COPRSQ9NQ92 184 aa18.99■□□□□ 0.63
COL27A1-206ENST00000490831 ABT1Q9ULW3 272 aaKnown RBP18.99■□□□□ 0.63
COL27A1-206ENST00000490831 WNT10BO00744 389 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 ANGEL2Q5VTE6 544 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms