RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 GRIN2CQ14957 1233 aa6.9□□□□□ -1.3
CSTF1-205ENST00000490539 BTLAQ7Z6A9 289 aa6.9□□□□□ -1.3
CSTF1-205ENST00000490539 KCNH4Q9UQ05 1017 aa6.9□□□□□ -1.3
CSTF1-205ENST00000490539 KIF15Q9NS87 1388 aa6.9□□□□□ -1.31
CSTF1-205ENST00000490539 TCOF1Q13428 1488 aaKnown RBP6.9□□□□□ -1.31
CSTF1-205ENST00000490539 PIK3R2O00459 728 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 DGKZQ13574 1117 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 OCLNQ16625 522 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 ZNF280CQ8ND82 737 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 MYO19Q96H55 970 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.89□□□□□ -1.31
CSTF1-205ENST00000490539 ABCC5O15440 1437 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 DUOX2Q9NRD8 1548 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 MAST1Q9Y2H9 1570 aa6.89□□□□□ -1.31
CSTF1-205ENST00000490539 SIGLEC1Q9BZZ2 1709 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 LRP5O75197 1615 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
CSTF1-205ENST00000490539 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 AMPD1P23109 780 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 B4GALNT3Q6L9W6 998 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 C16orf46Q6P387 395 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 QTRT2Q9H974 415 aaKnown RBP6.88□□□□□ -1.31
CSTF1-205ENST00000490539 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
CSTF1-205ENST00000490539 PLXNC1O60486 1568 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 FAM135AQ9P2D6 1515 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 ZMYM3Q14202 1370 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 C1QTNF9BB2RNN3 333 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 C2CD2LO14523 706 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 ALAS2P22557 587 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 BRD2P25440 801 aaKnown RBP6.87□□□□□ -1.31
CSTF1-205ENST00000490539 KCNQ4P56696 695 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 TYRO3Q06418 890 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 SFSWAPQ12872 951 aaKnown RBP6.87□□□□□ -1.31
CSTF1-205ENST00000490539 ZNF468Q5VIY5 522 aaPredicted RBP6.87□□□□□ -1.31
CSTF1-205ENST00000490539 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
CSTF1-205ENST00000490539 IFT43Q96FT9 208 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 PNMA5Q96PV4 448 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 MKNK1Q9BUB5 465 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 FAM13BQ9NYF5 915 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 USTQ9Y2C2 406 aa6.87□□□□□ -1.31
CSTF1-205ENST00000490539 ROCK1Q13464 1354 aa6.86□□□□□ -1.31
CSTF1-205ENST00000490539 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
CSTF1-205ENST00000490539 ARSDP51689 593 aa6.86□□□□□ -1.31
CSTF1-205ENST00000490539 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
CSTF1-205ENST00000490539 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
CSTF1-205ENST00000490539 NPATQ14207 1427 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 ANKRD50Q9ULJ7 1429 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 CROCC2H7BZ55 1655 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 MICAL2O94851 1124 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 IDH3AP50213 366 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 COX20Q5RI15 118 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 CD163Q86VB7 1156 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 SUV39H2Q9H5I1 410 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 C11orf16Q9NQ32 467 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 EIF2AK4Q9P2K8 1649 aaKnown RBP6.85□□□□□ -1.31
CSTF1-205ENST00000490539 KDM5DQ9BY66 1539 aa6.85□□□□□ -1.31
CSTF1-205ENST00000490539 GNB5O14775 395 aa6.84□□□□□ -1.31
CSTF1-205ENST00000490539 SIN3BO75182 1162 aa6.84□□□□□ -1.31
CSTF1-205ENST00000490539 ARID4AP29374 1257 aaPredicted RBP6.84□□□□□ -1.31
CSTF1-205ENST00000490539 PCBP4P57723 403 aaKnown RBP6.84□□□□□ -1.31
CSTF1-205ENST00000490539 NAA30Q147X3 362 aaPredicted RBP6.84□□□□□ -1.31
CSTF1-205ENST00000490539 LINC00114Q6XXX2 140 aa6.84□□□□□ -1.31
CSTF1-205ENST00000490539 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.31
CSTF1-205ENST00000490539 ADGRL2O95490 1459 aa6.84□□□□□ -1.31
CSTF1-205ENST00000490539 RRBP1Q9P2E9 1410 aaKnown RBP6.84□□□□□ -1.32
CSTF1-205ENST00000490539 MROH2AA6NES4 1674 aa6.84□□□□□ -1.32
CSTF1-205ENST00000490539 CPS1P31327 1500 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 LRRC7Q96NW7 1537 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 EPXP11678 715 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 CCINQ13939 588 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 ABTB2Q8N961 1025 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 BHMTQ93088 406 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 LRFN2Q9ULH4 789 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 CAMSAP1Q5T5Y3 1602 aa6.83□□□□□ -1.32
CSTF1-205ENST00000490539 CLTCQ00610 1675 aaKnown RBP6.82□□□□□ -1.32
CSTF1-205ENST00000490539 TMEM88BA6NKF7 163 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 SSFA2P28290 1259 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 INPP5BP32019 993 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 PCSK7Q16549 785 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 THEMISQ8N1K5 641 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-205ENST00000490539 SLC30A3Q99726 388 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 NOP53Q9NZM5 478 aaKnown RBP6.82□□□□□ -1.32
CSTF1-205ENST00000490539 STIM2Q9P246 746 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 DMGDHQ9UI17 866 aaKnown RBP6.82□□□□□ -1.32
CSTF1-205ENST00000490539 TNRQ92752 1358 aa6.82□□□□□ -1.32
CSTF1-205ENST00000490539 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 RNF17Q9BXT8 1623 aaKnown RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 ELOA3CA0A087WX78 387 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms