RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
SRSF4-204ENST00000489898 BRCA2P51587 3418 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 E9PSI1 815 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 CCER2I3L3R5 266 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 ALDH1L1O75891 902 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 C15orf52Q6ZUT6 534 aaKnown RBP15.06■□□□□ 0
SRSF4-204ENST00000489898 CERS5Q8N5B7 392 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 ZBED3Q96IU2 234 aaPredicted RBP15.06■□□□□ 0
SRSF4-204ENST00000489898 ZNF594Q96JF6 807 aaPredicted RBP15.06■□□□□ 0
SRSF4-204ENST00000489898 BCL2L13Q9BXK5 485 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
SRSF4-204ENST00000489898 WBP1LQ9NX94 342 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 AOX1Q06278 1338 aa15.06■□□□□ 0
SRSF4-204ENST00000489898 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
SRSF4-204ENST00000489898 CYP4F22Q6NT55 531 aa15.05■□□□□ -0
SRSF4-204ENST00000489898 LMBR1LQ6UX01 489 aa15.05■□□□□ -0
SRSF4-204ENST00000489898 AGBL3Q8NEM8 1001 aa15.05■□□□□ -0
SRSF4-204ENST00000489898 GGA3Q9NZ52 723 aa15.05■□□□□ -0
SRSF4-204ENST00000489898 ZNF804BA4D1E1 1349 aa15.05■□□□□ -0
SRSF4-204ENST00000489898 PTPRCP08575 1304 aa15.04■□□□□ -0
SRSF4-204ENST00000489898 PODNQ7Z5L7 613 aa15.04■□□□□ -0
SRSF4-204ENST00000489898 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
SRSF4-204ENST00000489898 LEMD3Q9Y2U8 911 aa15.04■□□□□ -0
SRSF4-204ENST00000489898 FAM155AB1AL88 458 aaPredicted RBP15.03■□□□□ -0
SRSF4-204ENST00000489898 TAF5LO75529 589 aa15.03■□□□□ -0
SRSF4-204ENST00000489898 CELF2O95319 508 aaKnown RBP15.03■□□□□ -0
SRSF4-204ENST00000489898 DEFB115Q30KQ5 88 aa15.03■□□□□ -0
SRSF4-204ENST00000489898 HHIPL1Q96JK4 782 aa15.03■□□□□ -0
SRSF4-204ENST00000489898 CAPNS2Q96L46 248 aa15.03■□□□□ -0
SRSF4-204ENST00000489898 ZIC5Q96T25 663 aa15.03■□□□□ -0
SRSF4-204ENST00000489898 PUS3Q9BZE2 481 aaKnown RBP15.03■□□□□ -0
SRSF4-204ENST00000489898 CDK5RAP2Q96SN8 1893 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 MYO5AQ9Y4I1 1855 aaKnown RBP15.02■□□□□ -0
SRSF4-204ENST00000489898 USP17L3A6NCW0 530 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 USP17L4A6NCW7 530 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 AOC2O75106 756 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
SRSF4-204ENST00000489898 CDC37L1Q7L3B6 337 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 USP17L1Q7RTZ2 530 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 USP48Q86UV5 1035 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 HELBQ8NG08 1087 aaPredicted RBP15.02■□□□□ -0
SRSF4-204ENST00000489898 SRCIN1Q9C0H9 1055 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 COA1Q9GZY4 146 aa15.02■□□□□ -0
SRSF4-204ENST00000489898 BICC1Q9H694 974 aaKnown RBP15.02■□□□□ -0
SRSF4-204ENST00000489898 PITPNM2Q9BZ72 1349 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 ANKRD18BA2A2Z9 1011 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 H7C1D1 291 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 HSPA8P11142 646 aaKnown RBP15.01□□□□□ -0.01
SRSF4-204ENST00000489898 RFX5P48382 616 aaPredicted RBP15.01□□□□□ -0.01
SRSF4-204ENST00000489898 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
SRSF4-204ENST00000489898 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 CD209Q9NNX6 404 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 MYOZ2Q9NPC6 264 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 ABT1Q9ULW3 272 aaKnown RBP15.01□□□□□ -0.01
SRSF4-204ENST00000489898 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
SRSF4-204ENST00000489898 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
SRSF4-204ENST00000489898 IL1R1P14778 569 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
SRSF4-204ENST00000489898 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 RIPOR2Q9Y4F9 1068 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 DOCK2Q92608 1830 aa15□□□□□ -0.01
SRSF4-204ENST00000489898 MAST2Q6P0Q8 1798 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 WNT10BO00744 389 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 USP17L8P0C7I0 530 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
SRSF4-204ENST00000489898 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 CDCA5Q96FF9 252 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
SRSF4-204ENST00000489898 SCARF1Q14162 830 aa14.98□□□□□ -0.01
SRSF4-204ENST00000489898 RBM26Q5T8P6 1007 aaKnown RBP14.98□□□□□ -0.01
SRSF4-204ENST00000489898 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
SRSF4-204ENST00000489898 MYH2Q9UKX2 1941 aa14.98□□□□□ -0.01
SRSF4-204ENST00000489898 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 FOCADQ5VW36 1801 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 SASH1O94885 1247 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 KLHDC4Q8TBB5 520 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 TNNQ9UQP3 1299 aa14.97□□□□□ -0.01
SRSF4-204ENST00000489898 FAM205AQ6ZU69 1335 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 PTPRFP10586 1907 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 GRIK5Q16478 980 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
SRSF4-204ENST00000489898 PRDM10Q9NQV6 1147 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
SRSF4-204ENST00000489898 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
SRSF4-204ENST00000489898 GTF2IP78347 998 aa14.95□□□□□ -0.02
SRSF4-204ENST00000489898 LDHAL6AQ6ZMR3 332 aa14.95□□□□□ -0.02
SRSF4-204ENST00000489898 TDRD7Q8NHU6 1098 aaKnown RBP14.95□□□□□ -0.02
SRSF4-204ENST00000489898 C9orf78Q9NZ63 289 aaPredicted RBP14.95□□□□□ -0.02
SRSF4-204ENST00000489898 CHMP3Q9Y3E7 222 aa14.95□□□□□ -0.02
SRSF4-204ENST00000489898 ZSWIM8A7E2V4 1837 aa14.94□□□□□ -0.02
SRSF4-204ENST00000489898 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
SRSF4-204ENST00000489898 SLC10A3P09131 477 aa14.94□□□□□ -0.02
SRSF4-204ENST00000489898 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
SRSF4-204ENST00000489898 FGFR2P21802 821 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms