RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CFAP70Q5T0N1 1121 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 FLCNQ8NFG4 579 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 TPCN2Q8NHX9 752 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 MUC3BQ9H195 1237 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 ATG3Q9NT62 314 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 TSPAN15O95858 294 aa5.24□□□□□ -1.57
PRPF4-203ENST00000488937 INHBBP09529 407 aa5.24□□□□□ -1.57
PRPF4-203ENST00000488937 BEND4Q6ZU67 534 aa5.24□□□□□ -1.57
PRPF4-203ENST00000488937 ATG4DQ86TL0 474 aaPredicted RBP5.24□□□□□ -1.57
PRPF4-203ENST00000488937 SMG9Q9H0W8 520 aaKnown RBP5.24□□□□□ -1.57
PRPF4-203ENST00000488937 RBSNQ9H1K0 784 aa5.24□□□□□ -1.57
PRPF4-203ENST00000488937 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
PRPF4-203ENST00000488937 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.23□□□□□ -1.57
PRPF4-203ENST00000488937 USP17L3A6NCW0 530 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 USP17L4A6NCW7 530 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 PALM3A6NDB9 673 aaPredicted RBP5.23□□□□□ -1.57
PRPF4-203ENST00000488937 RARAP10276 462 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 EIF2AK2P19525 551 aaKnown RBP5.23□□□□□ -1.57
PRPF4-203ENST00000488937 NRLP54845 237 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 SETDB1Q15047 1291 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 RTN1Q16799 776 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 CCDC102BQ68D86 513 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 USP17L2Q6R6M4 530 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 USP17L1Q7RTZ2 530 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 CHMP4AQ9BY43 222 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 PPP1R12CQ9BZL4 782 aa5.23□□□□□ -1.57
PRPF4-203ENST00000488937 MAFBQ9Y5Q3 323 aaPredicted RBP5.23□□□□□ -1.57
PRPF4-203ENST00000488937 TMEM88BA6NKF7 163 aa5.22□□□□□ -1.57
PRPF4-203ENST00000488937 TXNDC2Q86VQ3 553 aa5.22□□□□□ -1.57
PRPF4-203ENST00000488937 AMIGO3Q86WK7 504 aa5.22□□□□□ -1.57
PRPF4-203ENST00000488937 MFSD14AQ96MC6 490 aa5.22□□□□□ -1.57
PRPF4-203ENST00000488937 KIAA1522Q9P206 1035 aaPredicted RBP5.22□□□□□ -1.57
PRPF4-203ENST00000488937 TFIP11Q9UBB9 837 aaKnown RBP5.22□□□□□ -1.57
PRPF4-203ENST00000488937 GHRHP01286 108 aa5.21□□□□□ -1.58
PRPF4-203ENST00000488937 IGHA2P01877 340 aa5.21□□□□□ -1.58
PRPF4-203ENST00000488937 DEPDC4Q8N2C3 294 aa5.21□□□□□ -1.58
PRPF4-203ENST00000488937 LARGE2Q8N3Y3 721 aa5.21□□□□□ -1.58
PRPF4-203ENST00000488937 C2orf49Q9BVC5 232 aaPredicted RBP5.21□□□□□ -1.58
PRPF4-203ENST00000488937 TMPRSS5Q9H3S3 457 aa5.21□□□□□ -1.58
PRPF4-203ENST00000488937 CARNS1A5YM72 827 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 ZBTB42B2RXF5 422 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 ZBTB7BO15156 539 aaPredicted RBP5.2□□□□□ -1.58
PRPF4-203ENST00000488937 ARSDP51689 593 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 MLLT1Q03111 559 aaPredicted RBP5.2□□□□□ -1.58
PRPF4-203ENST00000488937 ANKLE2Q86XL3 938 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 IL22RA1Q8N6P7 574 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 RELTQ969Z4 430 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 PLD4Q96BZ4 506 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 NGLY1Q96IV0 654 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 OSBPL1AQ9BXW6 950 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 KCNF1Q9H3M0 494 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 VRTNQ9H8Y1 702 aa5.2□□□□□ -1.58
PRPF4-203ENST00000488937 DKK1O94907 266 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 BMP3P12645 472 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 CLDN10P78369 228 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 ZNF792Q3KQV3 632 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 KANK4Q5T7N3 995 aaPredicted RBP5.19□□□□□ -1.58
PRPF4-203ENST00000488937 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.19□□□□□ -1.58
PRPF4-203ENST00000488937 KRT25Q7Z3Z0 450 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 PPP1R16BQ96T49 567 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 FAM53CQ9NYF3 392 aa5.19□□□□□ -1.58
PRPF4-203ENST00000488937 MKRN1Q9UHC7 482 aaKnown RBP5.19□□□□□ -1.58
PRPF4-203ENST00000488937 ATAD2Q6PL18 1390 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 ATG7O95352 703 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 F13BP05160 661 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 PSAPP07602 524 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 ERCC3P19447 782 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 CANXP27824 592 aaKnown RBP5.18□□□□□ -1.58
PRPF4-203ENST00000488937 IDH3AP50213 366 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 GDF6Q6KF10 455 aaPredicted RBP5.18□□□□□ -1.58
PRPF4-203ENST00000488937 DNAJC14Q6Y2X3 702 aaPredicted RBP5.18□□□□□ -1.58
PRPF4-203ENST00000488937 ACAD11Q709F0 780 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 SIX5Q8N196 739 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 TLR7Q9NYK1 1049 aaKnown RBP5.18□□□□□ -1.58
PRPF4-203ENST00000488937 ZFATQ9P243 1243 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 DMGDHQ9UI17 866 aaKnown RBP5.18□□□□□ -1.58
PRPF4-203ENST00000488937 KIAA1024Q9UPX6 916 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 HIF3AQ9Y2N7 669 aa5.18□□□□□ -1.58
PRPF4-203ENST00000488937 WISP1O95388 367 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 TARSP26639 723 aaKnown RBP5.17□□□□□ -1.58
PRPF4-203ENST00000488937 LMOD1P29536 600 aaPredicted RBP5.17□□□□□ -1.58
PRPF4-203ENST00000488937 INPP5BP32019 993 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 GGNQ86UU5 652 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 OGFOD1Q8N543 542 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 GLIS3Q8NEA6 775 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 IFT43Q96FT9 208 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 C20orf173Q96LM9 149 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 METTL22Q9BUU2 404 aaPredicted RBP5.17□□□□□ -1.58
PRPF4-203ENST00000488937 PPME1Q9Y570 386 aa5.17□□□□□ -1.58
PRPF4-203ENST00000488937 LOC102724428A0A0B4J2F2 783 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 MEGF11A6BM72 1044 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 LRRC10BA6NIK2 292 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 FAM196BA6NMK8 535 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 HOXD8P13378 290 aaPredicted RBP5.16□□□□□ -1.58
PRPF4-203ENST00000488937 RFX1P22670 979 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 SOX18P35713 384 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 SIK1P57059 783 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 PTK7Q13308 1070 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 PLCL1Q15111 1095 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 HFE2Q6ZVN8 426 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms