RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 COL4A5P29400 1685 aa13.98□□□□□ -0.17
ARHGEF39-204ENST00000488918 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 MS4A1P11836 297 aa13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 TBC1D10BQ4KMP7 808 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 KCNQ5Q9NR82 932 aa13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
ARHGEF39-204ENST00000488918 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 IFIT1P09914 478 aaKnown RBP13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 TRIM27P14373 513 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 UBE4AQ14139 1066 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 STRIP1Q5VSL9 837 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 PAXIP1Q6ZW49 1069 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.17
ARHGEF39-204ENST00000488918 MMP14P50281 582 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 GTF2IP78347 998 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 SAMD7Q7Z3H4 446 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 ANKRD44Q8N8A2 993 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
ARHGEF39-204ENST00000488918 GNAI2P04899 355 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 HIBADHP31937 336 aaKnown RBP13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 HTRA3P83110 453 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 SIL1Q9H173 461 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 CD209Q9NNX6 404 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
ARHGEF39-204ENST00000488918 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 SLC5A1P13866 664 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 C15orf52Q6ZUT6 534 aaKnown RBP13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 TRPM4Q8TD43 1214 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 MEIS3Q99687 375 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 MYOZ2Q9NPC6 264 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 COL4A1P02462 1669 aa13.93□□□□□ -0.18
ARHGEF39-204ENST00000488918 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 EYA2O00167 538 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 MYO1BO43795 1136 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 PDE8BO95263 885 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 CELF2O95319 508 aaKnown RBP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 GNL3LQ9NVN8 582 aaKnown RBP13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
ARHGEF39-204ENST00000488918 SHTN1A0MZ66 631 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 SNAP23O00161 211 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 KLRK1P26718 216 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 OS9Q13438 667 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 SCARF1Q14162 830 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 DACT2Q5SW24 774 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 USP48Q86UV5 1035 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 KIAA0825Q8IV33 1275 aa13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
ARHGEF39-204ENST00000488918 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 F8W031 263 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 CIAO1O76071 339 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 SASH1O94885 1247 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 IL1R1P14778 569 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 NF2P35240 595 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 GYG1P46976 350 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 ZNF280AP59817 542 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 GRM1Q13255 1194 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 DLGAP5Q15398 846 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 LPIN2Q92539 896 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 GGA3Q9NZ52 723 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
ARHGEF39-204ENST00000488918 TRAF5O00463 557 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 ECE1P42892 770 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 PTPN12Q05209 780 aaKnown RBP13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 CHAF1AQ13111 956 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 LTBP1Q14766 1721 aa13.89□□□□□ -0.19
ARHGEF39-204ENST00000488918 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
ARHGEF39-204ENST00000488918 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
ARHGEF39-204ENST00000488918 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms