RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 COL26A1Q96A83 441 aa6.52□□□□□ -1.37
CCDC93-209ENST00000488908 FAM83CQ9BQN1 747 aa6.52□□□□□ -1.37
CCDC93-209ENST00000488908 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
CCDC93-209ENST00000488908 KCNF1Q9H3M0 494 aa6.52□□□□□ -1.37
CCDC93-209ENST00000488908 SEC31BQ9NQW1 1179 aa6.52□□□□□ -1.37
CCDC93-209ENST00000488908 ACIN1Q9UKV3 1341 aaKnown RBP6.51□□□□□ -1.37
CCDC93-209ENST00000488908 PRMT3O60678 531 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 PTPRAP18433 802 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 EPHA1P21709 976 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 CFAP70Q5T0N1 1121 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 ANKRD34AQ69YU3 496 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
CCDC93-209ENST00000488908 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 FOXD4L4Q8WXT5 416 aaPredicted RBP6.51□□□□□ -1.37
CCDC93-209ENST00000488908 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
CCDC93-209ENST00000488908 ABI2Q9NYB9 513 aaPredicted RBP6.51□□□□□ -1.37
CCDC93-209ENST00000488908 DDX3YO15523 660 aaKnown RBP6.5□□□□□ -1.37
CCDC93-209ENST00000488908 ADAM11O75078 769 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 BMP3P12645 472 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 ZAP70P43403 619 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 CABP4P57796 275 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 OCLNQ16625 522 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 BEND4Q6ZU67 534 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 NCAPG2Q86XI2 1143 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 UBASH3BQ8TF42 649 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 RNF208Q9H0X6 261 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
CCDC93-209ENST00000488908 HIF3AQ9Y2N7 669 aa6.5□□□□□ -1.37
CCDC93-209ENST00000488908 TNFRSF10BO14763 440 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 FAM26DQ5JW98 314 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 WNT8BQ93098 351 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 KLHDC7BQ96G42 594 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 ADAM19Q9H013 955 aa6.49□□□□□ -1.37
CCDC93-209ENST00000488908 H3BRJ5 948 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 PIP4K2BP78356 416 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 FDX2Q6P4F2 183 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 CEP120Q8N960 986 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 POP1Q99575 1024 aaKnown RBP6.48□□□□□ -1.37
CCDC93-209ENST00000488908 OSGEPQ9NPF4 335 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 ADGRE2Q9UHX3 823 aa6.48□□□□□ -1.37
CCDC93-209ENST00000488908 WDR64B1ANS9 1081 aa6.47□□□□□ -1.37
CCDC93-209ENST00000488908 CYP2E1P05181 493 aaPredicted RBP6.47□□□□□ -1.37
CCDC93-209ENST00000488908 PREPP48147 710 aa6.47□□□□□ -1.37
CCDC93-209ENST00000488908 FZD5Q13467 585 aa6.47□□□□□ -1.37
CCDC93-209ENST00000488908 MKNK1Q9BUB5 465 aa6.47□□□□□ -1.37
CCDC93-209ENST00000488908 RUSC1Q9BVN2 902 aa6.47□□□□□ -1.37
CCDC93-209ENST00000488908 GAS2O43903 313 aaKnown RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 PRKCSHP14314 528 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 ELOAQ14241 798 aaKnown RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 NAA30Q147X3 362 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 ABTB2Q8N961 1025 aa6.46□□□□□ -1.38
CCDC93-209ENST00000488908 CXXC1Q9P0U4 656 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-209ENST00000488908 PIM2Q9P1W9 311 aa6.46□□□□□ -1.38
CCDC93-209ENST00000488908 STIM2Q9P246 746 aa6.46□□□□□ -1.38
CCDC93-209ENST00000488908 NLRP12P59046 1061 aa6.45□□□□□ -1.38
CCDC93-209ENST00000488908 MFSD14AQ96MC6 490 aa6.45□□□□□ -1.38
CCDC93-209ENST00000488908 ZMYND15Q9H091 742 aa6.45□□□□□ -1.38
CCDC93-209ENST00000488908 ELP3Q9H9T3 547 aa6.45□□□□□ -1.38
CCDC93-209ENST00000488908 ZMIZ1Q9ULJ6 1067 aa6.45□□□□□ -1.38
CCDC93-209ENST00000488908 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
CCDC93-209ENST00000488908 ARID1BQ8NFD5 2236 aaPredicted RBP6.45□□□□□ -1.38
CCDC93-209ENST00000488908 MAP4P27816 1152 aaKnown RBP6.44□□□□□ -1.38
CCDC93-209ENST00000488908 HOXA10P31260 410 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-209ENST00000488908 ARL4DP49703 201 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 FAM69CQ0P6D2 419 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 CAPN12Q6ZSI9 719 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 SLC7A3Q8WY07 619 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 ATG3Q9NT62 314 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
CCDC93-209ENST00000488908 MEGF11A6BM72 1044 aa6.43□□□□□ -1.38
CCDC93-209ENST00000488908 CPSF6Q16630 551 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCDC93-209ENST00000488908 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
CCDC93-209ENST00000488908 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
CCDC93-209ENST00000488908 TMEM63CQ9P1W3 806 aa6.43□□□□□ -1.38
CCDC93-209ENST00000488908 KANSL3Q9P2N6 904 aa6.43□□□□□ -1.38
CCDC93-209ENST00000488908 ZBTB39O15060 712 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
CCDC93-209ENST00000488908 RXRBP28702 533 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 NUTM2GQ5VZR2 741 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 STK32AQ8WU08 396 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 NUDT16Q96DE0 195 aaKnown RBP6.42□□□□□ -1.38
CCDC93-209ENST00000488908 OSBPL1AQ9BXW6 950 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 SALL4Q9UJQ4 1053 aa6.42□□□□□ -1.38
CCDC93-209ENST00000488908 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-209ENST00000488908 FOSL1P15407 271 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 CES1P23141 567 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 C19orf57Q0VDD7 668 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 SGO2Q562F6 1265 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 FBXL6Q8N531 539 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 CNTN3Q9P232 1028 aa6.41□□□□□ -1.38
CCDC93-209ENST00000488908 ZNF777Q9ULD5 760 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-209ENST00000488908 NFKBIEO00221 500 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 F13BP05160 661 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms