RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 PDIA6Q15084 440 aa12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 GDF15Q99988 308 aa12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 ZSWIM8A7E2V4 1837 aa12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 COL9A1P20849 921 aa12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
SUPT20H-218ENST00000488590 BMP8BP34820 402 aa12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 RAPGEFL1Q9UHV5 662 aa12.35□□□□□ -0.43
SUPT20H-218ENST00000488590 USP17L3A6NCW0 530 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 USP17L4A6NCW7 530 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 SASH1O94885 1247 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 GJB1P08034 283 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 USP17L1Q7RTZ2 530 aa12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
SUPT20H-218ENST00000488590 UNCXA6NJT0 531 aa12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 ARHGEF6Q15052 776 aa12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 DACT2Q5SW24 774 aa12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
SUPT20H-218ENST00000488590 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 UFL1O94874 794 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 CTGFP29279 349 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 BCAMP50895 628 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 RPS8P62241 208 aaKnown RBP12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 BRI3BPQ8WY22 251 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 GUCD1Q96NT3 240 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 CDH23Q9H251 3354 aa12.32□□□□□ -0.44
SUPT20H-218ENST00000488590 LACTBP83111 547 aaPredicted RBP12.31□□□□□ -0.44
SUPT20H-218ENST00000488590 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
SUPT20H-218ENST00000488590 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
SUPT20H-218ENST00000488590 DEFB129Q9H1M3 183 aa12.31□□□□□ -0.44
SUPT20H-218ENST00000488590 COL1A1P02452 1464 aaPredicted RBP12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 G3V3G9 751 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 EVI5O60447 810 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 ANXA1P04083 346 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 CCL5P13501 91 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 GGA1Q9UJY5 639 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
SUPT20H-218ENST00000488590 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 PLA2G5P39877 138 aa12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 PRMT2P55345 433 aa12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 TAF1CQ15572 869 aaPredicted RBP12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
SUPT20H-218ENST00000488590 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 PPP1R12BO60237 982 aaPredicted RBP12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 TLR2O60603 784 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 GNRH1P01148 92 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
SUPT20H-218ENST00000488590 GRK4P32298 578 aa12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 NBPF12Q5TAG4 269 aaPredicted RBP12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 ANKRD13AQ8IZ07 590 aa12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 OPTNQ96CV9 577 aa12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 RNF208Q9H0X6 261 aa12.27□□□□□ -0.45
SUPT20H-218ENST00000488590 SGPL1O95470 568 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 TRIM47Q96LD4 638 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 SRRDQ9UH36 339 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 OTOFQ9HC10 1997 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
SUPT20H-218ENST00000488590 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 OSBPP22059 807 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 MMP14P50281 582 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 CCL15Q16663 113 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 XAGE3Q8WTP9 111 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 UNC93B1Q9H1C4 597 aa12.25□□□□□ -0.45
SUPT20H-218ENST00000488590 ELP3Q9H9T3 547 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms