RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ARAP2Q8WZ64 1704 aa24.31■■□□□ 1.48
NECAB3-213ENST00000488489 SLC5A1P13866 664 aa24.31■■□□□ 1.48
NECAB3-213ENST00000488489 ARID4AP29374 1257 aaPredicted RBP24.3■■□□□ 1.48
NECAB3-213ENST00000488489 TM4SF1P30408 202 aa24.3■■□□□ 1.48
NECAB3-213ENST00000488489 DDIT3P35638 169 aa24.3■■□□□ 1.48
NECAB3-213ENST00000488489 ZMYM1Q5SVZ6 1142 aa24.3■■□□□ 1.48
NECAB3-213ENST00000488489 WTIPA6NIX2 430 aaPredicted RBP24.29■■□□□ 1.48
NECAB3-213ENST00000488489 RNF113AO15541 343 aaKnown RBP24.29■■□□□ 1.48
NECAB3-213ENST00000488489 ZNF827Q17R98 1081 aa24.29■■□□□ 1.48
NECAB3-213ENST00000488489 FOXD4L1Q9NU39 408 aa24.29■■□□□ 1.48
NECAB3-213ENST00000488489 TNRC6CQ9HCJ0 1690 aaKnown RBP24.29■■□□□ 1.48
NECAB3-213ENST00000488489 MINPP1Q9UNW1 487 aa24.29■■□□□ 1.48
NECAB3-213ENST00000488489 NPHP1O15259 732 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 CYP2E1P05181 493 aaPredicted RBP24.28■■□□□ 1.48
NECAB3-213ENST00000488489 CREB3L3Q68CJ9 461 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 CNBD1Q8NA66 436 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 HELLSQ9NRZ9 838 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 KCNJ4P48050 445 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 RPS8P62241 208 aaKnown RBP24.28■■□□□ 1.48
NECAB3-213ENST00000488489 ADCK5Q3MIX3 580 aa24.28■■□□□ 1.48
NECAB3-213ENST00000488489 PRR5LQ6MZQ0 368 aa24.27■■□□□ 1.48
NECAB3-213ENST00000488489 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 HSP90AA1P07900 732 aaKnown RBP24.26■■□□□ 1.47
NECAB3-213ENST00000488489 BCAMP50895 628 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 AKT1S1Q96B36 256 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 SLC27A2O14975 620 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 UQCRFS1P1P0C7P4 283 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 OSBP2Q969R2 916 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 TFCP2L1Q9NZI6 479 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 HMG20BQ9P0W2 317 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 TAF6LQ9Y6J9 622 aa24.26■■□□□ 1.47
NECAB3-213ENST00000488489 MAST3O60307 1309 aa24.25■■□□□ 1.47
NECAB3-213ENST00000488489 RASGRF1Q13972 1273 aa24.25■■□□□ 1.47
NECAB3-213ENST00000488489 MYO5AQ9Y4I1 1855 aaKnown RBP24.25■■□□□ 1.47
NECAB3-213ENST00000488489 VPS53Q5VIR6 699 aa24.25■■□□□ 1.47
NECAB3-213ENST00000488489 PIH1D3Q9NQM4 214 aaKnown RBP24.25■■□□□ 1.47
NECAB3-213ENST00000488489 M0R2C6 588 aa24.24■■□□□ 1.47
NECAB3-213ENST00000488489 SERPINB2P05120 415 aa24.24■■□□□ 1.47
NECAB3-213ENST00000488489 CPA1P15085 419 aa24.24■■□□□ 1.47
NECAB3-213ENST00000488489 CHMP5Q9NZZ3 219 aa24.24■■□□□ 1.47
NECAB3-213ENST00000488489 DDR1Q08345 913 aa24.23■■□□□ 1.47
NECAB3-213ENST00000488489 TTC14Q96N46 770 aa24.23■■□□□ 1.47
NECAB3-213ENST00000488489 ZKSCAN1P17029 563 aaPredicted RBP24.23■■□□□ 1.47
NECAB3-213ENST00000488489 CASTP20810 708 aaKnown RBP24.23■■□□□ 1.47
NECAB3-213ENST00000488489 COL9A3Q14050 684 aaPredicted RBP24.23■■□□□ 1.47
NECAB3-213ENST00000488489 SPATA5Q8NB90 893 aa24.23■■□□□ 1.47
NECAB3-213ENST00000488489 TMX3Q96JJ7 454 aa24.23■■□□□ 1.47
NECAB3-213ENST00000488489 JAKMIP1Q96N16 626 aaKnown RBP24.23■■□□□ 1.47
NECAB3-213ENST00000488489 MYH7P12883 1935 aa24.23■■□□□ 1.47
NECAB3-213ENST00000488489 ZFYP08048 801 aaPredicted RBP24.22■■□□□ 1.47
NECAB3-213ENST00000488489 MCM2P49736 904 aa24.22■■□□□ 1.47
NECAB3-213ENST00000488489 TNS1Q9HBL0 1735 aaKnown RBP24.22■■□□□ 1.47
NECAB3-213ENST00000488489 HMGB2P26583 209 aaKnown RBP24.22■■□□□ 1.47
NECAB3-213ENST00000488489 UBE4AQ14139 1066 aa24.22■■□□□ 1.47
NECAB3-213ENST00000488489 NOL8Q76FK4 1167 aaKnown RBP24.22■■□□□ 1.47
NECAB3-213ENST00000488489 COL23A1Q86Y22 540 aaPredicted RBP24.22■■□□□ 1.47
NECAB3-213ENST00000488489 TTF1Q15361 905 aaPredicted RBP24.21■■□□□ 1.47
NECAB3-213ENST00000488489 LRRFIP1Q32MZ4 808 aaKnown RBP24.21■■□□□ 1.47
NECAB3-213ENST00000488489 TM6SF1Q9BZW5 370 aa24.21■■□□□ 1.47
NECAB3-213ENST00000488489 ZSWIM6Q9HCJ5 1215 aa24.21■■□□□ 1.47
NECAB3-213ENST00000488489 POLRMTO00411 1230 aaKnown RBP24.2■■□□□ 1.47
NECAB3-213ENST00000488489 WASHC4Q2M389 1173 aa24.2■■□□□ 1.47
NECAB3-213ENST00000488489 PUS7LQ9H0K6 701 aaKnown RBP24.2■■□□□ 1.47
NECAB3-213ENST00000488489 HSPD1P10809 573 aaKnown RBP24.2■■□□□ 1.46
NECAB3-213ENST00000488489 GYG1P46976 350 aa24.2■■□□□ 1.46
NECAB3-213ENST00000488489 RNF20Q5VTR2 975 aa24.2■■□□□ 1.46
NECAB3-213ENST00000488489 SLC51AQ86UW1 340 aa24.2■■□□□ 1.46
NECAB3-213ENST00000488489 IDH1O75874 414 aaKnown RBP24.19■■□□□ 1.46
NECAB3-213ENST00000488489 ADD2P35612 726 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 TSGA10IPQ3SY00 556 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 SLC9C2Q5TAH2 1124 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 APPBP2Q92624 585 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 U3KPZ7 1027 aaPredicted RBP24.19■■□□□ 1.46
NECAB3-213ENST00000488489 RPAP1Q9BWH6 1393 aaPredicted RBP24.19■■□□□ 1.46
NECAB3-213ENST00000488489 ZGPATQ8N5A5 531 aaKnown RBP24.19■■□□□ 1.46
NECAB3-213ENST00000488489 DSCC1Q9BVC3 393 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.19■■□□□ 1.468e-7■■■□□ 18.3
NECAB3-213ENST00000488489 ZNF804BA4D1E1 1349 aa24.19■■□□□ 1.46
NECAB3-213ENST00000488489 CYP21A2P08686 494 aa24.18■■□□□ 1.46
NECAB3-213ENST00000488489 AK2P54819 239 aa24.18■■□□□ 1.46
NECAB3-213ENST00000488489 IQSEC3Q9UPP2 1182 aaPredicted RBP24.18■■□□□ 1.46
NECAB3-213ENST00000488489 FOXP2O15409 715 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 KLRK1P26718 216 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 CRY2Q49AN0 593 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 RUFY3Q7L099 469 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 WWC3Q9ULE0 1092 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 ST5P78524 1137 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 GRAPQ13588 217 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 GRAPLQ8TC17 118 aaPredicted RBP24.17■■□□□ 1.46
NECAB3-213ENST00000488489 FAM84BQ96KN1 310 aaPredicted RBP24.17■■□□□ 1.46
NECAB3-213ENST00000488489 CYP46A1Q9Y6A2 500 aa24.17■■□□□ 1.46
NECAB3-213ENST00000488489 LARP6Q9BRS8 491 aaKnown RBP24.16■■□□□ 1.46
NECAB3-213ENST00000488489 CIZ1Q9ULV3 898 aaPredicted RBP24.16■■□□□ 1.46
NECAB3-213ENST00000488489 A0A0G2JLW4 131 aa24.16■■□□□ 1.46
NECAB3-213ENST00000488489 PDE6AP16499 860 aa24.16■■□□□ 1.46
NECAB3-213ENST00000488489 CUL4AQ13619 759 aa24.16■■□□□ 1.46
NECAB3-213ENST00000488489 ZSCAN25Q6NSZ9 544 aa24.16■■□□□ 1.46
NECAB3-213ENST00000488489 TCRBV5S4A2TA0A5A2 114 aa24.15■■□□□ 1.46
NECAB3-213ENST00000488489 UBE3CQ15386 1083 aa24.15■■□□□ 1.46
NECAB3-213ENST00000488489 ANKRD2Q9GZV1 360 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms