RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 FAM81AQ8TBF8 368 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 C17orf50Q8WW18 174 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 TSGA10Q9BZW7 698 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 TMEM98Q9Y2Y6 226 aa7.32□□□□□ -1.24
SIK3-212ENST00000488337 ARAP3Q8WWN8 1544 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 ZEB2O60315 1214 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 RAPGEF3O95398 923 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 LMBR1Q8WVP7 490 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 BICD1Q96G01 975 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 CCDC34Q96HJ3 373 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 PHLPP2Q6ZVD8 1323 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 PREX2Q70Z35 1606 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 SRGAP3O43295 1099 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 TPP2P29144 1249 aaPredicted RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 GCKP35557 465 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 USP4Q13107 963 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 LAMB3Q13751 1172 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 KCNB1Q14721 858 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 FAM200AQ8TCP9 573 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 CABP2Q9NPB3 220 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 FAM169AQ9Y6X4 670 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 SAMD9LQ8IVG5 1584 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 TTC41PQ6P2S7 1318 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 TTC21BQ7Z4L5 1316 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 CYP27B1O15528 508 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 MFSD4BQ5TF39 518 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 MIS18BP1Q6P0N0 1132 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 SARM1Q6SZW1 724 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 MTHFD1LQ6UB35 978 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 ELOA2Q8IYF1 753 aaPredicted RBP7.31□□□□□ -1.24
SIK3-212ENST00000488337 ZFAND2BQ8WV99 257 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 SAAL1Q96ER3 474 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 IL17RAQ96F46 866 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 RGL1Q9NZL6 768 aa7.31□□□□□ -1.24
SIK3-212ENST00000488337 OPA1O60313 960 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 SKAP2O75563 359 aaPredicted RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 PRPF6O94906 941 aaKnown RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 GCLCP48506 637 aaPredicted RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.24
SIK3-212ENST00000488337 VPS53Q5VIR6 699 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 RBM43Q6ZSC3 357 aaKnown RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 PHC3Q8NDX5 983 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 MTA3Q9BTC8 594 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 TRIM7Q9C029 511 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 LMTK2Q8IWU2 1503 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 F8VZ95 297 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 SYT1P21579 422 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 RPL13P26373 211 aaKnown RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 MKRN4PQ13434 485 aaPredicted RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 HSP90B2PQ58FF3 399 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 BEND6Q5SZJ8 279 aaPredicted RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 RC3H1Q5TC82 1133 aaKnown RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 E4F1Q66K89 784 aaPredicted RBP7.3□□□□□ -1.24
SIK3-212ENST00000488337 ZNF280DQ6N043 979 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 DPY19L2Q6NUT2 758 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 B4GALNT2Q8NHY0 566 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 SLC39A2Q9NP94 309 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 ZNF510Q9Y2H8 683 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 POGZQ7Z3K3 1410 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 HECW2Q9P2P5 1572 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 SMNDC1O75940 238 aaKnown RBP eCLIP7.3□□□□□ -1.24
SIK3-212ENST00000488337 TRPC1P48995 793 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 ZBTB40Q9NUA8 1239 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 MYO5CQ9NQX4 1742 aa7.3□□□□□ -1.24
SIK3-212ENST00000488337 CCDC151A5D8V7 595 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 RHBDL3P58872 404 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 ARHGAP45Q92619 1136 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 VPS18Q9P253 973 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 RIPOR2Q9Y4F9 1068 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 CAPN15O75808 1086 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 TRIM65Q6PJ69 517 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 HDGFL2Q7Z4V5 671 aaPredicted RBP7.29□□□□□ -1.24
SIK3-212ENST00000488337 BRAPQ7Z569 592 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 HDAC7Q8WUI4 952 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 C1orf115Q9H7X2 142 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 MAPK8IP1Q9UQF2 711 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 TRAPPC8Q9Y2L5 1435 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 MED14O60244 1454 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 APBB1O00213 710 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 ST18O60284 1047 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
SIK3-212ENST00000488337 SMTNP53814 917 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 THEMIS2Q5TEJ8 643 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
SIK3-212ENST00000488337 UBA5Q9GZZ9 404 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 BICC1Q9H694 974 aaKnown RBP7.29□□□□□ -1.24
SIK3-212ENST00000488337 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 FAN1Q9Y2M0 1017 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 PARP3Q9Y6F1 533 aa7.29□□□□□ -1.24
SIK3-212ENST00000488337 PLCH2O75038 1416 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms