RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
HFM1-208ENST00000488023 GRIK1P39086 918 aa5.59□□□□□ -1.51
HFM1-208ENST00000488023 SIK1P57059 783 aa5.59□□□□□ -1.51
HFM1-208ENST00000488023 C11orf91Q3C1V1 193 aa5.59□□□□□ -1.51
HFM1-208ENST00000488023 Q6ZS46 218 aa5.59□□□□□ -1.51
HFM1-208ENST00000488023 IL22RA1Q8N6P7 574 aa5.59□□□□□ -1.51
HFM1-208ENST00000488023 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.51
HFM1-208ENST00000488023 CDK11AQ9UQ88 783 aaPredicted RBP5.59□□□□□ -1.51
HFM1-208ENST00000488023 GDF6Q6KF10 455 aaPredicted RBP5.59□□□□□ -1.52
HFM1-208ENST00000488023 SRA1Q9HD15 236 aaKnown RBP5.59□□□□□ -1.52
HFM1-208ENST00000488023 KIAA1522Q9P206 1035 aaPredicted RBP5.59□□□□□ -1.52
HFM1-208ENST00000488023 USP20Q9Y2K6 914 aa5.59□□□□□ -1.52
HFM1-208ENST00000488023 RTCBQ9Y3I0 505 aaKnown RBP5.59□□□□□ -1.52
HFM1-208ENST00000488023 RBM47A0AV96 593 aaKnown RBP5.58□□□□□ -1.52
HFM1-208ENST00000488023 PRR19A6NJB7 356 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 HMGB1P09429 215 aaKnown RBP5.58□□□□□ -1.52
HFM1-208ENST00000488023 SETDB1Q15047 1291 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 MAP4K3Q8IVH8 894 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 AGGF1Q8N302 714 aaeCLIP5.58□□□□□ -1.521e-6■■■□□ 16.8
HFM1-208ENST00000488023 COL26A1Q96A83 441 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 STOML1Q9UBI4 398 aa5.58□□□□□ -1.52
HFM1-208ENST00000488023 GNEQ9Y223 722 aaKnown RBP5.58□□□□□ -1.52
HFM1-208ENST00000488023 PRMT3O60678 531 aa5.57□□□□□ -1.52
HFM1-208ENST00000488023 GLB1P16278 677 aa5.57□□□□□ -1.52
HFM1-208ENST00000488023 FKBP5Q13451 457 aaPredicted RBP5.57□□□□□ -1.52
HFM1-208ENST00000488023 ABI1Q8IZP0 508 aa5.57□□□□□ -1.52
HFM1-208ENST00000488023 DCAF11Q8TEB1 546 aa5.57□□□□□ -1.52
HFM1-208ENST00000488023 XYLBO75191 536 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 GHRHP01286 108 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 PSAPP07602 524 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 SPOCD1Q6ZMY3 1216 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 TXNDC2Q86VQ3 553 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 UBL7Q96S82 380 aaPredicted RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 CXXC1Q9P0U4 656 aaPredicted RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 MMP20O60882 483 aa5.56□□□□□ -1.52
HFM1-208ENST00000488023 HOXD8P13378 290 aaPredicted RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 CMTR1Q8N1G2 835 aaKnown RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 MRRFQ96E11 262 aaKnown RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
HFM1-208ENST00000488023 ATP2B4P23634 1241 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 SCNN1AP37088 669 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 NFIAQ12857 509 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 RGL4Q8IZJ4 473 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 FAM177A1Q8N128 213 aaPredicted RBP5.55□□□□□ -1.52
HFM1-208ENST00000488023 ASIC4Q96FT7 647 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 RBSNQ9H1K0 784 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 LRFN2Q9ULH4 789 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 TRIM33Q9UPN9 1127 aa5.55□□□□□ -1.52
HFM1-208ENST00000488023 SOX18P35713 384 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 NOM1Q5C9Z4 860 aaKnown RBP5.54□□□□□ -1.52
HFM1-208ENST00000488023 COX20Q5RI15 118 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 C16orf46Q6P387 395 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 TREML1Q86YW5 311 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 CACTIN-AS1Q8N1I8 211 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 ARMC10Q8N2F6 343 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 MUC3BQ9H195 1237 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 PPME1Q9Y570 386 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 KCNMB2Q9Y691 235 aa5.54□□□□□ -1.52
HFM1-208ENST00000488023 DHX15O43143 795 aaKnown RBP5.53□□□□□ -1.52
HFM1-208ENST00000488023 BRD2P25440 801 aaKnown RBP5.53□□□□□ -1.52
HFM1-208ENST00000488023 DNAJC14Q6Y2X3 702 aaPredicted RBP5.53□□□□□ -1.52
HFM1-208ENST00000488023 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
HFM1-208ENST00000488023 WISP1O95388 367 aa5.53□□□□□ -1.52
HFM1-208ENST00000488023 LINC01387J3KSC0 135 aa5.52□□□□□ -1.53
HFM1-208ENST00000488023 CBLL1Q75N03 491 aa5.52□□□□□ -1.53
HFM1-208ENST00000488023 CEP41Q9BYV8 373 aa5.52□□□□□ -1.53
HFM1-208ENST00000488023 FAM13BQ9NYF5 915 aa5.52□□□□□ -1.53
HFM1-208ENST00000488023 ZNF16P17020 682 aaPredicted RBP5.51□□□□□ -1.53
HFM1-208ENST00000488023 ITGB5P18084 799 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
HFM1-208ENST00000488023 RNF43Q68DV7 783 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 ACAD11Q709F0 780 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 NLRP13Q86W25 1043 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 SAP130Q9H0E3 1048 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 C7orf69Q9H7B7 122 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 KCNK4Q9NYG8 393 aa5.51□□□□□ -1.53
HFM1-208ENST00000488023 UVSSAQ2YD98 709 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 B4GALNT3Q6L9W6 998 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 TRIM42Q8IWZ5 723 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 FAM46AQ96IP4 442 aaKnown RBP5.5□□□□□ -1.53
HFM1-208ENST00000488023 DBNDD2Q9BQY9 259 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 MKNK1Q9BUB5 465 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 SEPT3Q9UH03 358 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 TNFRSF10BO14763 440 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 TM4SF5O14894 197 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 ECM1Q16610 540 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 ETFBKMTQ8IXQ9 262 aa5.5□□□□□ -1.53
HFM1-208ENST00000488023 UTP4Q969X6 686 aaKnown RBP5.5□□□□□ -1.53
HFM1-208ENST00000488023 HMX2A2RU54 273 aa5.49□□□□□ -1.53
HFM1-208ENST00000488023 DBX1A6NMT0 343 aa5.49□□□□□ -1.53
HFM1-208ENST00000488023 CDC27P30260 824 aa5.49□□□□□ -1.53
HFM1-208ENST00000488023 ATP11AP98196 1134 aa5.49□□□□□ -1.53
HFM1-208ENST00000488023 NAA30Q147X3 362 aaPredicted RBP5.49□□□□□ -1.53
HFM1-208ENST00000488023 TRIP4Q15650 581 aaPredicted RBP5.49□□□□□ -1.53
HFM1-208ENST00000488023 COL13A1Q5TAT6 717 aaPredicted RBP5.49□□□□□ -1.53
HFM1-208ENST00000488023 TXNDC11Q6PKC3 985 aa5.49□□□□□ -1.53
HFM1-208ENST00000488023 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 321.7 ms