RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 MTFR1LQ9H019 292 aa10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 PNNQ9H307 717 aaKnown RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 LAS1LQ9Y4W2 734 aaKnown RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 CNTNAP4Q9C0A0 1308 aa10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 A1BGP04217 495 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 CANXP27824 592 aaKnown RBP10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 SH3BP2P78314 561 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 GPR162Q16538 588 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 FMNL2Q96PY5 1086 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 USP16Q9Y5T5 823 aa10.21□□□□□ -0.77
NECTIN3-209ENST00000488016 SSFA2P28290 1259 aa10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 SOS1Q07889 1333 aaPredicted RBP10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 QPCTQ16769 361 aa10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 BAP1Q92560 729 aa10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 TSPYL4Q9UJ04 414 aa10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
NECTIN3-209ENST00000488016 LILRB3O75022 631 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 RPS6KA4O75676 772 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 COL24A1Q17RW2 1714 aa10.19□□□□□ -0.78
NECTIN3-209ENST00000488016 COL15A1P39059 1388 aa10.18□□□□□ -0.78
NECTIN3-209ENST00000488016 ZNF511Q8NB15 262 aa10.18□□□□□ -0.78
NECTIN3-209ENST00000488016 DDRGK1Q96HY6 314 aa10.18□□□□□ -0.78
NECTIN3-209ENST00000488016 ARXQ96QS3 562 aa10.18□□□□□ -0.78
NECTIN3-209ENST00000488016 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
NECTIN3-209ENST00000488016 LAMB4A4D0S4 1761 aa10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 ANXA1P04083 346 aa10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 GYS1P13807 737 aa10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 NBPF10Q6P3W6 841 aaKnown RBP10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 NBPF15Q8N660 670 aa10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
NECTIN3-209ENST00000488016 USP42Q9H9J4 1324 aaKnown RBP10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 SNRPA1P09661 255 aaKnown RBP10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 RFC4P35249 363 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 HPS1Q92902 700 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 TSR2Q969E8 191 aaKnown RBP10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 MAP10Q9P2G4 905 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 WASF2Q9Y6W5 498 aa10.16□□□□□ -0.78
NECTIN3-209ENST00000488016 POTECB2RU33 542 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 CHL1O00533 1208 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 STARD3NLO95772 234 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 MMP10P09238 476 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 HSPA6P17066 643 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 POLD1P28340 1107 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 EIF5P55010 431 aaKnown RBP10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 PROSER3Q2NL68 480 aa10.15□□□□□ -0.78
NECTIN3-209ENST00000488016 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 SIAH2O43255 324 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 ZNF853P0CG23 659 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 MYL6BP14649 208 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 VARSP26640 1264 aaKnown RBP10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 DDR1Q08345 913 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 SCN7AQ01118 1682 aa10.14□□□□□ -0.79
NECTIN3-209ENST00000488016 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
NECTIN3-209ENST00000488016 TTLL7Q6ZT98 887 aa10.13□□□□□ -0.79
NECTIN3-209ENST00000488016 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
NECTIN3-209ENST00000488016 BCORQ6W2J9 1755 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 CAMTA2O94983 1202 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 TSPYL6Q8N831 410 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 C8orf58Q8NAV2 365 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 ARMC2Q8NEN0 867 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
NECTIN3-209ENST00000488016 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 TCERG1O14776 1098 aaKnown RBP10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 NFIXQ14938 502 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 AGERQ15109 404 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 HLFQ16534 295 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 ZNF526Q8TF50 670 aaPredicted RBP10.11□□□□□ -0.79
NECTIN3-209ENST00000488016 IFT57Q9NWB7 429 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms