RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 RAC1P63000 192 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 DAB2P98082 770 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 PSAPL1Q6NUJ1 521 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 XKR5Q6UX68 686 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 CMTR1Q8N1G2 835 aaKnown RBP9.25□□□□□ -0.93
CUL3-211ENST00000487558 FRMD6Q96NE9 622 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 BACH2Q9BYV9 841 aa9.25□□□□□ -0.93
CUL3-211ENST00000487558 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
CUL3-211ENST00000487558 EIF1AYO14602 144 aaKnown RBP9.24□□□□□ -0.93
CUL3-211ENST00000487558 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
CUL3-211ENST00000487558 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
CUL3-211ENST00000487558 NFKB1P19838 968 aa9.24□□□□□ -0.93
CUL3-211ENST00000487558 PRSS36Q5K4E3 855 aa9.24□□□□□ -0.93
CUL3-211ENST00000487558 PNMA5Q96PV4 448 aa9.24□□□□□ -0.93
CUL3-211ENST00000487558 A6NHS1 94 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 CPNE3O75131 537 aaKnown RBP9.23□□□□□ -0.93
CUL3-211ENST00000487558 MAP3K6O95382 1288 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 NRG1Q02297 640 aaPredicted RBP9.23□□□□□ -0.93
CUL3-211ENST00000487558 ORC1Q13415 861 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 PDE12Q6L8Q7 609 aaKnown RBP9.23□□□□□ -0.93
CUL3-211ENST00000487558 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 ZNF438Q7Z4V0 828 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 TXNRD3Q86VQ6 643 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
CUL3-211ENST00000487558 PSMG3-AS1Q96PY0 264 aa9.23□□□□□ -0.93
CUL3-211ENST00000487558 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
CUL3-211ENST00000487558 SCAMP3O14828 347 aaKnown RBP9.22□□□□□ -0.93
CUL3-211ENST00000487558 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
CUL3-211ENST00000487558 DMRTC2Q8IXT2 367 aaPredicted RBP9.22□□□□□ -0.93
CUL3-211ENST00000487558 FAM161BQ96MY7 647 aa9.22□□□□□ -0.93
CUL3-211ENST00000487558 VTI1BQ9UEU0 232 aa9.22□□□□□ -0.93
CUL3-211ENST00000487558 TNFRSF21O75509 655 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 GNA15P30679 374 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 ARTNQ5T4W7 220 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 TMEM87AQ8NBN3 555 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 SETDB2Q96T68 719 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 SPG7Q9UQ90 795 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 USP20Q9Y2K6 914 aa9.21□□□□□ -0.94
CUL3-211ENST00000487558 ZBTB42B2RXF5 422 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 GRIK5Q16478 980 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 PCSK7Q16549 785 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 FAM35AQ86V20 835 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 SNX29Q8TEQ0 813 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 SSBP4Q9BWG4 385 aaPredicted RBP9.2□□□□□ -0.94
CUL3-211ENST00000487558 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
CUL3-211ENST00000487558 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
CUL3-211ENST00000487558 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
CUL3-211ENST00000487558 ELP3Q9H9T3 547 aa9.19□□□□□ -0.94
CUL3-211ENST00000487558 RNF19AQ9NV58 838 aa9.19□□□□□ -0.94
CUL3-211ENST00000487558 FRRS1LQ9P0K9 344 aa9.19□□□□□ -0.94
CUL3-211ENST00000487558 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 DTWD1Q8N5C7 304 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 LPIN3Q9BQK8 851 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 AK5Q9Y6K8 562 aa9.18□□□□□ -0.94
CUL3-211ENST00000487558 GIPC1O14908 333 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 PHACTR2O75167 634 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 XYLBO75191 536 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 EGFRP00533 1210 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 CPB1P15086 417 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 PLAURQ03405 335 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 TRIP4Q15650 581 aaPredicted RBP9.17□□□□□ -0.94
CUL3-211ENST00000487558 PERM1Q5SV97 790 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 DHX32Q7L7V1 743 aaKnown RBP9.17□□□□□ -0.94
CUL3-211ENST00000487558 FBXO11Q86XK2 927 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 TTC9Q92623 222 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 PMEPA1Q969W9 287 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 NLRP2Q9NX02 1062 aa9.17□□□□□ -0.94
CUL3-211ENST00000487558 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
CUL3-211ENST00000487558 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
CUL3-211ENST00000487558 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
CUL3-211ENST00000487558 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
CUL3-211ENST00000487558 C8orf37Q96NL8 207 aa9.16□□□□□ -0.94
CUL3-211ENST00000487558 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
CUL3-211ENST00000487558 USP21Q9UK80 565 aa9.16□□□□□ -0.94
CUL3-211ENST00000487558 IGSF3O75054 1194 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
CUL3-211ENST00000487558 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
CUL3-211ENST00000487558 GPLD1P80108 840 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
CUL3-211ENST00000487558 LDLRAD1Q5T700 205 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 KRT25Q7Z3Z0 450 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 NLRP13Q86W25 1043 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 TP53INP1Q96A56 240 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
CUL3-211ENST00000487558 SASH3O75995 380 aa9.14□□□□□ -0.95
CUL3-211ENST00000487558 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
CUL3-211ENST00000487558 HDLBPQ00341 1268 aaKnown RBP9.14□□□□□ -0.95
CUL3-211ENST00000487558 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
CUL3-211ENST00000487558 RNF34Q969K3 372 aa9.14□□□□□ -0.95
CUL3-211ENST00000487558 ABI2Q9NYB9 513 aaPredicted RBP9.14□□□□□ -0.95
CUL3-211ENST00000487558 MLLT1Q03111 559 aaPredicted RBP9.13□□□□□ -0.95
CUL3-211ENST00000487558 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
CUL3-211ENST00000487558 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
CUL3-211ENST00000487558 WFDC12Q8WWY7 111 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms