RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 CAP1Q01518 475 aa12.76□□□□□ -0.37
CDK11A-217ENST00000487462 ZNF333Q96JL9 665 aa12.76□□□□□ -0.37
CDK11A-217ENST00000487462 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
CDK11A-217ENST00000487462 PSME4Q14997 1843 aa12.76□□□□□ -0.37
CDK11A-217ENST00000487462 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-217ENST00000487462 BBOX1O75936 387 aa12.75□□□□□ -0.37
CDK11A-217ENST00000487462 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
CDK11A-217ENST00000487462 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-217ENST00000487462 PANK3Q9H999 370 aa12.75□□□□□ -0.37
CDK11A-217ENST00000487462 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
CDK11A-217ENST00000487462 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 SCARF1Q14162 830 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 TTLL7Q6ZT98 887 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 POLR3GLQ9BT43 218 aa12.74□□□□□ -0.37
CDK11A-217ENST00000487462 ECE2O60344 883 aa12.73□□□□□ -0.37
CDK11A-217ENST00000487462 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-217ENST00000487462 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
CDK11A-217ENST00000487462 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
CDK11A-217ENST00000487462 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
CDK11A-217ENST00000487462 LAMA2P24043 3122 aaKnown RBP12.72□□□□□ -0.37
CDK11A-217ENST00000487462 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 COL4A1P02462 1669 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 PRUNE2Q8WUY3 3088 aa12.72□□□□□ -0.37
CDK11A-217ENST00000487462 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
CDK11A-217ENST00000487462 VIL1P09327 827 aaKnown RBP12.71□□□□□ -0.37
CDK11A-217ENST00000487462 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
CDK11A-217ENST00000487462 ERO1AQ96HE7 468 aa12.71□□□□□ -0.37
CDK11A-217ENST00000487462 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
CDK11A-217ENST00000487462 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
CDK11A-217ENST00000487462 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDK11A-217ENST00000487462 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
CDK11A-217ENST00000487462 GRAPQ13588 217 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
CDK11A-217ENST00000487462 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 SPRYD7Q5W111 196 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
CDK11A-217ENST00000487462 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
CDK11A-217ENST00000487462 ZNF646O15015 1829 aaPredicted RBP12.69□□□□□ -0.38
CDK11A-217ENST00000487462 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
CDK11A-217ENST00000487462 SNPHO15079 494 aa12.68□□□□□ -0.38
CDK11A-217ENST00000487462 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
CDK11A-217ENST00000487462 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
CDK11A-217ENST00000487462 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
CDK11A-217ENST00000487462 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
CDK11A-217ENST00000487462 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
CDK11A-217ENST00000487462 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-217ENST00000487462 CRHR2Q13324 411 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 TCIRG1Q13488 830 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
CDK11A-217ENST00000487462 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 DPF3Q92784 378 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
CDK11A-217ENST00000487462 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
CDK11A-217ENST00000487462 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
CDK11A-217ENST00000487462 MANSC4A6NHS7 340 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-217ENST00000487462 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-217ENST00000487462 MCM10Q7L590 875 aa12.66□□□□□ -0.38
CDK11A-217ENST00000487462 GMLQ99445 158 aa12.66□□□□□ -0.38
CDK11A-217ENST00000487462 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
CDK11A-217ENST00000487462 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 INHBEP58166 350 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 GPSM2P81274 684 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 FOXK1P85037 733 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 SP3Q02447 781 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 NBPF9Q3BBW0 867 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
CDK11A-217ENST00000487462 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
CDK11A-217ENST00000487462 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
CDK11A-217ENST00000487462 MYL6BP14649 208 aa12.64□□□□□ -0.39
CDK11A-217ENST00000487462 PRKG1Q13976 671 aa12.64□□□□□ -0.39
CDK11A-217ENST00000487462 UBE2Q1Q7Z7E8 422 aa12.64□□□□□ -0.39
CDK11A-217ENST00000487462 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
CDK11A-217ENST00000487462 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 NF2P35240 595 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 PPP1R15BQ5SWA1 713 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 Q7L0L9 218 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 ARMC9Q7Z3E5 817 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms