RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
ATPAF1-205ENST00000487193 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 UFL1O94874 794 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 GJA8P48165 433 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 BCAMP50895 628 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 ZFYVE28Q9HCC9 887 aa16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-205ENST00000487193 FARP2O94887 1054 aaPredicted RBP16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 KIF22Q14807 665 aa16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 OGFOD1Q8N543 542 aa16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 ANKIB1Q9P2G1 1089 aa16.23■□□□□ 0.19
ATPAF1-205ENST00000487193 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 TESPA1A2RU30 521 aaPredicted RBP16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 CCL5P13501 91 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 APOBEC3FQ8IUX4 373 aaKnown RBP16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 LAMB1P07942 1786 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 PSME4Q14997 1843 aa16.22■□□□□ 0.19
ATPAF1-205ENST00000487193 RPTORQ8N122 1335 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 COL4A1P02462 1669 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 GJB1P08034 283 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 BMP8BP34820 402 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 MAP3K11Q16584 847 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 FAM122AQ96E09 287 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
ATPAF1-205ENST00000487193 PLA2G5P39877 138 aa16.2■□□□□ 0.18
ATPAF1-205ENST00000487193 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
ATPAF1-205ENST00000487193 GDF15Q99988 308 aa16.2■□□□□ 0.18
ATPAF1-205ENST00000487193 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
ATPAF1-205ENST00000487193 RPS8P62241 208 aaKnown RBP16.19■□□□□ 0.18
ATPAF1-205ENST00000487193 DEFB129Q9H1M3 183 aa16.19■□□□□ 0.18
ATPAF1-205ENST00000487193 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
ATPAF1-205ENST00000487193 FAM161BQ96MY7 647 aa16.18■□□□□ 0.18
ATPAF1-205ENST00000487193 PODXL2Q9NZ53 605 aa16.18■□□□□ 0.18
ATPAF1-205ENST00000487193 ZMYND8Q9ULU4 1186 aaPredicted RBP16.18■□□□□ 0.18
ATPAF1-205ENST00000487193 ANXA1P04083 346 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 GRK4P32298 578 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 OPTNQ96CV9 577 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 ELP3Q9H9T3 547 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 IRS2Q9Y4H2 1338 aa16.17■□□□□ 0.18
ATPAF1-205ENST00000487193 IREB2P48200 963 aaKnown RBP16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 PRMT2P55345 433 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 PODNQ7Z5L7 613 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 RAET1EQ8TD07 263 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
ATPAF1-205ENST00000487193 CCL15-CCL14A0A0B4J2E2 113 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 USP2O75604 605 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 GNRH1P01148 92 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 CCL15Q16663 113 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 DACT2Q5SW24 774 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 RSPH6AQ9H0K4 717 aa16.15■□□□□ 0.18
ATPAF1-205ENST00000487193 SSC5DA1L4H1 1573 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 UNCXA6NJT0 531 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 SGPL1O95470 568 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 SYN1P17600 705 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 ANKRD13AQ8IZ07 590 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
ATPAF1-205ENST00000487193 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 UBXN2AP68543 259 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 PDIA6Q15084 440 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 SUPT20HL1Q3ZLR7 823 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 NBPF12Q5TAG4 269 aaPredicted RBP16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 LRP10Q7Z4F1 713 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 SRRDQ9UH36 339 aa16.13■□□□□ 0.17
ATPAF1-205ENST00000487193 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 TLR2O60603 784 aa16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 WDHD1O75717 1129 aaPredicted RBP16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 CTGFP29279 349 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms