RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 AATKQ6ZMQ8 1374 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 EFCAB8A8MWE9 144 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 ARHGAP6O43182 974 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 MCM3P25205 808 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 HDXQ7Z353 690 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 CERS3Q8IU89 383 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.8□□□□□ -1
COL6A4P1-202ENST00000487147 BRMS1Q9HCU9 246 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 ZNF213O14771 459 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 ZNF202O95125 648 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 PNMA6AP0CW24 399 aaPredicted RBP8.8□□□□□ -1
COL6A4P1-202ENST00000487147 SLFNL1Q499Z3 407 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
COL6A4P1-202ENST00000487147 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 MAP3K5Q99683 1374 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 RHOXF2BP0C7M4 288 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 NLRP12P59046 1061 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 SARM1Q6SZW1 724 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 RHOXF2Q9BQY4 288 aa8.8□□□□□ -1
COL6A4P1-202ENST00000487147 OTUD7BQ6GQQ9 843 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 UBE3BQ7Z3V4 1068 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 BRAPQ7Z569 592 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 KIAA1328Q86T90 577 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 BICC1Q9H694 974 aaKnown RBP8.79□□□□□ -1
COL6A4P1-202ENST00000487147 A0A087WZG4 1122 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 A0A1B0GUL7 405 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 CTAGE9A4FU28 777 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 SEC31AO94979 1220 aaKnown RBP8.79□□□□□ -1
COL6A4P1-202ENST00000487147 NECTIN1Q15223 517 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 IQCEQ6IPM2 695 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 WASF1Q92558 559 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 NUP88Q99567 741 aaPredicted RBP8.79□□□□□ -1
COL6A4P1-202ENST00000487147 MAGEC2Q9UBF1 373 aaPredicted RBP8.79□□□□□ -1
COL6A4P1-202ENST00000487147 QRICH2Q9H0J4 1663 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 ASXL2Q76L83 1435 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 AP5Z1O43299 807 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 SLFN14P0C7P3 912 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 CHMP4BP1P59074 171 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
COL6A4P1-202ENST00000487147 ZNF569Q5MCW4 686 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 ADALQ6DHV7 355 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 NBPF11Q86T75 865 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 PGBD1Q96JS3 809 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 ALG1Q9BT22 464 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 ZFYVE16Q7Z3T8 1539 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 TTC21AQ8NDW8 1320 aa8.79□□□□□ -1
COL6A4P1-202ENST00000487147 IARSP41252 1262 aaKnown RBP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 MNAT1P51948 309 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC181Q5TID7 509 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 KLHDC4Q8TBB5 520 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 ZNF622Q969S3 477 aaKnown RBP eCLIP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 EAF2Q96CJ1 260 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 EDC3Q96F86 508 aaKnown RBP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 WDHD1O75717 1129 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CDR1P51861 262 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 MICU3Q86XE3 530 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 NCOA7Q8NI08 942 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 NUP133Q8WUM0 1156 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CNKSR2Q8WXI2 1034 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 FUCA2Q9BTY2 467 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 FTOQ9C0B1 505 aaKnown RBP eCLIP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 BABAM1Q9NWV8 329 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CEP131Q9UPN4 1083 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 METAP2P50579 478 aaKnown RBP eCLIP8.78□□□□□ -1
COL6A4P1-202ENST00000487147 TUBB4BP68371 445 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC57Q2TAC2 916 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 AMOTQ4VCS5 1084 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 PPP4R3CPQ6ZMV5 832 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 ST7Q9NRC1 585 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 SNRKQ9NRH2 765 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 ATP8B1O43520 1251 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 PIP4K2BP78356 416 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 OSCARQ8IYS5 282 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 IL25Q9H293 177 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 RCOR1Q9UKL0 485 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 PCDHA7Q9UN72 937 aa8.78□□□□□ -1
COL6A4P1-202ENST00000487147 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1
COL6A4P1-202ENST00000487147 RBM6P78332 1123 aaKnown RBP8.77□□□□□ -1
COL6A4P1-202ENST00000487147 DPCR1Q3MIW9 517 aa8.77□□□□□ -1
COL6A4P1-202ENST00000487147 ANO1Q5XXA6 986 aa8.77□□□□□ -1
COL6A4P1-202ENST00000487147 FBXO3Q9UK99 471 aa8.77□□□□□ -1
COL6A4P1-202ENST00000487147 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1
COL6A4P1-202ENST00000487147 EFCAB6Q5THR3 1501 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 PRC1O43663 620 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 TXLNAP40222 546 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 RESTQ13127 1097 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 MTX1Q13505 466 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 SETBP1Q9Y6X0 1596 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 GOLGA8AA7E2F4 631 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 YEATS4O95619 227 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 TUBBP07437 444 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 NDUFA8P51970 172 aa8.77□□□□□ -1.01
COL6A4P1-202ENST00000487147 EIF5P55010 431 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms