RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 BBOX1O75936 387 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 FKBP1BP68106 108 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 KIF6Q6ZMV9 814 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 IFNL1Q8IU54 200 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 RAPGEFL1Q9UHV5 662 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 PTCH2Q9Y6C5 1203 aa8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 HOXB7P09629 217 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 RPS12P25398 132 aaKnown RBP8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 GPSM2P81274 684 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 CALD1Q05682 793 aaKnown RBP8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 PDIA6Q15084 440 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 NBPF9Q3BBW0 867 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 SPRYD7Q5W111 196 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 LRP10Q7Z4F1 713 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 GMLQ99445 158 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 MRS2Q9HD23 443 aa8.34□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 GJA5P36382 358 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 GNAI1P63096 354 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 SREBF2Q12772 1141 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 CRHR2Q13324 411 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 KRT24Q2M2I5 525 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 PROSER3Q2NL68 480 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 LDLRAD1Q5T700 205 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 NECTIN2Q92692 538 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 DPF3Q92784 378 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 CELF1Q92879 486 aaKnown RBP8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 CLMNQ96JQ2 1002 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 PTPN18Q99952 460 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
CTDSPL-208ENST00000486978 ANXA1P04083 346 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 GRAPQ13588 217 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 MTFR1Q15390 333 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 SLC4A8Q2Y0W8 1093 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 UBE2Q1Q7Z7E8 422 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 GRAPLQ8TC17 118 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
CTDSPL-208ENST00000486978 SPDYE4A6NLX3 237 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 ZBTB7BO15156 539 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 PARP10Q53GL7 1025 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 DUSP27Q5VZP5 1158 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 COPS6Q7L5N1 327 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 XAGE3Q8WTP9 111 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 ERO1AQ96HE7 468 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 ARHGAP39Q9C0H5 1083 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 CHPF2Q9P2E5 772 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 STAP2Q9UGK3 403 aa8.31□□□□□ -1.08
CTDSPL-208ENST00000486978 SP3Q02447 781 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 AIMP1Q12904 312 aaKnown RBP8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 CCDC27Q2M243 656 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 SLC9C1Q4G0N8 1177 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 HSP90AB3PQ58FF7 597 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 PPP1R42Q7Z4L9 355 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 DEFB123Q8N688 67 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 TBC1D16Q8TBP0 767 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 WNK4Q96J92 1243 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 UTP14AQ9BVJ6 771 aaKnown RBP8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 MTMR10Q9NXD2 777 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 DBF4Q9UBU7 674 aaPredicted RBP8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 STXBP5LQ9Y2K9 1186 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 SSUH2Q9Y2M2 353 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
CTDSPL-208ENST00000486978 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 ANGEL1Q9UNK9 670 aaKnown RBP8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
CTDSPL-208ENST00000486978 MANSC4A6NHS7 340 aaPredicted RBP8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 WNT10BO00744 389 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 AGBL3Q8NEM8 1001 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 PLBD2Q8NHP8 589 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms