RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 TRPA1O75762 1119 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 ATP2B4P23634 1241 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 TTC39BQ5VTQ0 682 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 FOXD4L4Q8WXT5 416 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 HHIPQ96QV1 700 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 RBSNQ9H1K0 784 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 ELP3Q9H9T3 547 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 SRA1Q9HD15 236 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 KANSL3Q9P2N6 904 aa7.63□□□□□ -1.19
SNRNP40-205ENST00000486941 ARID3CA6NKF2 412 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 CDC27P30260 824 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 HGSNATQ68CP4 663 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 NBPF11Q86T75 865 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 MAP4K3Q8IVH8 894 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 C1orf127Q8N9H9 656 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 CHRDQ9H2X0 955 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 SALL4Q9UJQ4 1053 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 NESP48681 1621 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 PEG3Q9GZU2 1588 aa7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 BAZ1BQ9UIG0 1483 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-205ENST00000486941 FSCN2O14926 492 aa7.61□□□□□ -1.19
SNRNP40-205ENST00000486941 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-205ENST00000486941 ADAM19Q9H013 955 aa7.61□□□□□ -1.19
SNRNP40-205ENST00000486941 MUC3BQ9H195 1237 aa7.61□□□□□ -1.19
SNRNP40-205ENST00000486941 GLB1P16278 677 aa7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 CACTIN-AS1Q8N1I8 211 aa7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 EDEM1Q92611 657 aa7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-205ENST00000486941 TMEM88BA6NKF7 163 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 SMNDC1O75940 238 aaKnown RBP eCLIP7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 SSTR4P31391 388 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 MTMR3Q13615 1198 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 PDE12Q6L8Q7 609 aaKnown RBP7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 XKR5Q6UX68 686 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 ACAD11Q709F0 780 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 ABTB2Q8N961 1025 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 FAM46AQ96IP4 442 aaKnown RBP7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 RAXQ9Y2V3 346 aa7.59□□□□□ -1.19
SNRNP40-205ENST00000486941 ADAMTS4O75173 837 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 PDGFAP04085 211 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 CD97P48960 835 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 NCAPG2Q86XI2 1143 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 KRTAP1-3Q8IUG1 177 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 SPACA7Q96KW9 195 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 DZANK1Q9NVP4 752 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
SNRNP40-205ENST00000486941 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
SNRNP40-205ENST00000486941 TGFB1P01137 390 aa7.57□□□□□ -1.2
SNRNP40-205ENST00000486941 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-205ENST00000486941 ZNF438Q7Z4V0 828 aa7.57□□□□□ -1.2
SNRNP40-205ENST00000486941 HELQQ8TDG4 1101 aa7.57□□□□□ -1.2
SNRNP40-205ENST00000486941 MROH2BQ7Z745 1585 aa7.56□□□□□ -1.2
SNRNP40-205ENST00000486941 MPSTP25325 297 aa7.56□□□□□ -1.2
SNRNP40-205ENST00000486941 EIF1AXP47813 144 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-205ENST00000486941 PHLDB3Q6NSJ2 640 aa7.56□□□□□ -1.2
SNRNP40-205ENST00000486941 ZDHHC13Q8IUH4 622 aa7.56□□□□□ -1.2
SNRNP40-205ENST00000486941 THOC2Q8NI27 1593 aaKnown RBP7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 SSFA2P28290 1259 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 GTF3C2Q8WUA4 911 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 C7orf69Q9H7B7 122 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
SNRNP40-205ENST00000486941 PDS5BQ9NTI5 1447 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 HMX2A2RU54 273 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 PTPRAP18433 802 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 CES1P23141 567 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 NOM1Q5C9Z4 860 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 SLC51AQ86UW1 340 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 C1orf115Q9H7X2 142 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 SOX13Q9UN79 622 aa7.54□□□□□ -1.2
SNRNP40-205ENST00000486941 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 H3BRJ5 948 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 EREGO14944 169 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 VN1R5Q7Z5H4 357 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 CCDC97Q96F63 343 aaPredicted RBP7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 MYRFLQ96LU7 910 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 SEC31BQ9NQW1 1179 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 KIF21AQ7Z4S6 1674 aa7.53□□□□□ -1.2
SNRNP40-205ENST00000486941 PDE2AO00408 941 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 SOX1O00570 391 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 DHX15O43143 795 aaKnown RBP7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 DLGAP3O95886 979 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 NPR3P17342 541 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 MZF1P28698 734 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 PREPP48147 710 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 NLRP12P59046 1061 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 C8orf34Q49A92 452 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 DCAF11Q8TEB1 546 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 NXPE3Q969Y0 559 aa7.52□□□□□ -1.21
SNRNP40-205ENST00000486941 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms