RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KLHL40Q2TBA0 621 aa14.27□□□□□ -0.12
PKP4-213ENST00000486254 FBXL16Q8N461 479 aa14.27□□□□□ -0.12
PKP4-213ENST00000486254 C4AP0C0L4 1744 aa14.27□□□□□ -0.12
PKP4-213ENST00000486254 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
PKP4-213ENST00000486254 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 CTNNA3Q9UI47 895 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 AFF2P51816 1311 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 LAMA4Q16363 1823 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 ADRA2BP18089 450 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 MCAMP43121 646 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 PKP1Q13835 747 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
PKP4-213ENST00000486254 NEK1Q96PY6 1258 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 AGXT2Q9BYV1 514 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 NDUFB9Q9Y6M9 179 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
PKP4-213ENST00000486254 CYP21A2P08686 494 aa14.25□□□□□ -0.13
PKP4-213ENST00000486254 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
PKP4-213ENST00000486254 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
PKP4-213ENST00000486254 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
PKP4-213ENST00000486254 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
PKP4-213ENST00000486254 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
PKP4-213ENST00000486254 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
PKP4-213ENST00000486254 ADD2P35612 726 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 ZAP70P43403 619 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 SCARF1Q14162 830 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 OSBP2Q969R2 916 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 SEC62Q99442 399 aaKnown RBP14.24□□□□□ -0.13
PKP4-213ENST00000486254 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
PKP4-213ENST00000486254 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
PKP4-213ENST00000486254 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
PKP4-213ENST00000486254 WDR19Q8NEZ3 1342 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 FSD2A1L4K1 749 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 PDCP20941 246 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 HSPA1LP34931 641 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
PKP4-213ENST00000486254 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
PKP4-213ENST00000486254 ATP6V1DQ9Y5K8 247 aa14.23□□□□□ -0.13
PKP4-213ENST00000486254 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 IGSF3O75054 1194 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 TOB2Q14106 344 aaPredicted RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 ME3Q16798 604 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 TMED8Q6PL24 325 aaPredicted RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 LMBRD1Q9NUN5 540 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 BSDC1Q9NW68 430 aaPredicted RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 PDS5AQ29RF7 1337 aaKnown RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 M0R2C6 588 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 PHKA1P46020 1223 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 NOL8Q76FK4 1167 aaKnown RBP14.22□□□□□ -0.13
PKP4-213ENST00000486254 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 TPCN1Q9ULQ1 816 aa14.22□□□□□ -0.13
PKP4-213ENST00000486254 CARMIL3Q8ND23 1372 aa14.21□□□□□ -0.13
PKP4-213ENST00000486254 GNPATO15228 680 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 STX6O43752 255 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 ZPR1O75312 459 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 LARGE1O95461 756 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 MBD3O95983 291 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 ZSCAN22P10073 491 aaPredicted RBP14.21□□□□□ -0.14
PKP4-213ENST00000486254 CPA1P15085 419 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 ST3GAL1Q11201 340 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 LLPHQ9BRT6 129 aaKnown RBP14.21□□□□□ -0.14
PKP4-213ENST00000486254 SEC31BQ9NQW1 1179 aa14.21□□□□□ -0.14
PKP4-213ENST00000486254 FOXP2O15409 715 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 SYT1P21579 422 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 EVCP57679 992 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
PKP4-213ENST00000486254 CHRNDQ07001 517 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 ALX1Q15699 326 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
PKP4-213ENST00000486254 ERFEQ4G0M1 354 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 SPATA5Q8NB90 893 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 SETDB2Q96T68 719 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
PKP4-213ENST00000486254 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
PKP4-213ENST00000486254 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 SEMA3EO15041 775 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 GPAA1O43292 621 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 CHGBP05060 677 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 MAP3K12Q12852 859 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 STOX1Q6ZVD7 989 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 CCDC83Q8IWF9 413 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
PKP4-213ENST00000486254 E7EWF7 191 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms