RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
COL1A1-206ENST00000485870 USP17L1Q7RTZ2 530 aa23.12■■□□□ 1.29
COL1A1-206ENST00000485870 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
COL1A1-206ENST00000485870 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
COL1A1-206ENST00000485870 IPO8O15397 1037 aaKnown RBP23.11■■□□□ 1.29
COL1A1-206ENST00000485870 HIRAP54198 1017 aaPredicted RBP23.11■■□□□ 1.29
COL1A1-206ENST00000485870 TBC1D10BQ4KMP7 808 aaPredicted RBP23.11■■□□□ 1.29
COL1A1-206ENST00000485870 SAMD7Q7Z3H4 446 aa23.11■■□□□ 1.29
COL1A1-206ENST00000485870 TNNQ9UQP3 1299 aa23.1■■□□□ 1.29
COL1A1-206ENST00000485870 TRIM27P14373 513 aa23.09■■□□□ 1.29
COL1A1-206ENST00000485870 RBM26Q5T8P6 1007 aaKnown RBP23.09■■□□□ 1.29
COL1A1-206ENST00000485870 ATF7IPQ6VMQ6 1270 aa23.09■■□□□ 1.29
COL1A1-206ENST00000485870 KLHDC4Q8TBB5 520 aa23.09■■□□□ 1.29
COL1A1-206ENST00000485870 KLRG1Q96E93 195 aa23.09■■□□□ 1.29
COL1A1-206ENST00000485870 CREBZFQ9NS37 354 aa23.09■■□□□ 1.29
COL1A1-206ENST00000485870 IRS2Q9Y4H2 1338 aa23.08■■□□□ 1.29
COL1A1-206ENST00000485870 EGFRP00533 1210 aa23.08■■□□□ 1.29
COL1A1-206ENST00000485870 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
COL1A1-206ENST00000485870 AGBL3Q8NEM8 1001 aa23.08■■□□□ 1.29
COL1A1-206ENST00000485870 MEIS3Q99687 375 aa23.08■■□□□ 1.29
COL1A1-206ENST00000485870 MXD3Q9BW11 206 aa23.08■■□□□ 1.29
COL1A1-206ENST00000485870 FMR1Q06787 632 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL1A1-206ENST00000485870 LRRC24Q50LG9 513 aa23.07■■□□□ 1.28
COL1A1-206ENST00000485870 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
COL1A1-206ENST00000485870 RIPOR2Q9Y4F9 1068 aa23.07■■□□□ 1.28
COL1A1-206ENST00000485870 ZNF609O15014 1411 aa23.07■■□□□ 1.28
COL1A1-206ENST00000485870 ZNF646O15015 1829 aaPredicted RBP23.06■■□□□ 1.28
COL1A1-206ENST00000485870 TMEM88BA6NKF7 163 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 TRAF5O00463 557 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 KIF4BQ2VIQ3 1234 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 DACT2Q5SW24 774 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 C15orf52Q6ZUT6 534 aaKnown RBP23.06■■□□□ 1.28
COL1A1-206ENST00000485870 ZC3H15Q8WU90 426 aaKnown RBP23.06■■□□□ 1.28
COL1A1-206ENST00000485870 GMLQ99445 158 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 CD209Q9NNX6 404 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 LRRFIP2Q9Y608 721 aaKnown RBP23.06■■□□□ 1.28
COL1A1-206ENST00000485870 MROH5Q6ZUA9 1318 aa23.06■■□□□ 1.28
COL1A1-206ENST00000485870 METTL24Q5JXM2 366 aa23.05■■□□□ 1.28
COL1A1-206ENST00000485870 STRIP1Q5VSL9 837 aa23.05■■□□□ 1.28
COL1A1-206ENST00000485870 ZNF804AQ7Z570 1209 aa23.05■■□□□ 1.28
COL1A1-206ENST00000485870 GLIS2Q9BZE0 524 aaPredicted RBP23.05■■□□□ 1.28
COL1A1-206ENST00000485870 PGAP2Q9UHJ9 254 aa23.05■■□□□ 1.28
COL1A1-206ENST00000485870 USP17L8P0C7I0 530 aa23.04■■□□□ 1.28
COL1A1-206ENST00000485870 RFX5P48382 616 aaPredicted RBP23.04■■□□□ 1.28
COL1A1-206ENST00000485870 GTF2IP78347 998 aa23.04■■□□□ 1.28
COL1A1-206ENST00000485870 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
COL1A1-206ENST00000485870 TTLL5Q6EMB2 1281 aa23.04■■□□□ 1.28
COL1A1-206ENST00000485870 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
COL1A1-206ENST00000485870 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
COL1A1-206ENST00000485870 ZNF280AP59817 542 aaPredicted RBP23.03■■□□□ 1.28
COL1A1-206ENST00000485870 UBE4AQ14139 1066 aa23.03■■□□□ 1.28
COL1A1-206ENST00000485870 TRPM7Q96QT4 1865 aa23.02■■□□□ 1.28
COL1A1-206ENST00000485870 GNAI3P08754 354 aa23.02■■□□□ 1.28
COL1A1-206ENST00000485870 MYO3BQ8WXR4 1341 aa23.02■■□□□ 1.28
COL1A1-206ENST00000485870 PTPN12Q05209 780 aaKnown RBP23.01■■□□□ 1.27
COL1A1-206ENST00000485870 MYOZ2Q9NPC6 264 aa23.01■■□□□ 1.27
COL1A1-206ENST00000485870 POLR2AP24928 1970 aaKnown RBP23.01■■□□□ 1.27
COL1A1-206ENST00000485870 EYA2O00167 538 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 IL1R1P14778 569 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 GYG1P46976 350 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 CDC37L1Q7L3B6 337 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 USP48Q86UV5 1035 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 TMEM57Q8N5G2 664 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 VGLL2Q8N8G2 317 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 SIL1Q9H173 461 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 GGA3Q9NZ52 723 aa23■■□□□ 1.27
COL1A1-206ENST00000485870 ASTN2O75129 1339 aaPredicted RBP23■■□□□ 1.27
COL1A1-206ENST00000485870 PDE8BO95263 885 aa22.99■■□□□ 1.27
COL1A1-206ENST00000485870 KIAA0825Q8IV33 1275 aa22.99■■□□□ 1.27
COL1A1-206ENST00000485870 OGFOD1Q8N543 542 aa22.99■■□□□ 1.27
COL1A1-206ENST00000485870 DCPSQ96C86 337 aaKnown RBP22.99■■□□□ 1.27
COL1A1-206ENST00000485870 ABT1Q9ULW3 272 aaKnown RBP22.99■■□□□ 1.27
COL1A1-206ENST00000485870 JAG2Q9Y219 1238 aa22.99■■□□□ 1.27
COL1A1-206ENST00000485870 HIBADHP31937 336 aaKnown RBP22.98■■□□□ 1.27
COL1A1-206ENST00000485870 SCARF1Q14162 830 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 CST9Q5W186 159 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 KRT26Q7Z3Y9 468 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
COL1A1-206ENST00000485870 JMYQ8N9B5 988 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 FAM84BQ96KN1 310 aaPredicted RBP22.98■■□□□ 1.27
COL1A1-206ENST00000485870 ZNF408Q9H9D4 720 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 CNTNAP1P78357 1384 aa22.98■■□□□ 1.27
COL1A1-206ENST00000485870 PCNTO95613 3336 aa22.97■■□□□ 1.27
COL1A1-206ENST00000485870 CELF2O95319 508 aaKnown RBP22.97■■□□□ 1.27
COL1A1-206ENST00000485870 DLK2Q6UY11 383 aa22.97■■□□□ 1.27
COL1A1-206ENST00000485870 PA2G4Q9UQ80 394 aaKnown RBP22.97■■□□□ 1.27
COL1A1-206ENST00000485870 ADM5C9JUS6 153 aa22.96■■□□□ 1.27
COL1A1-206ENST00000485870 ATG9AQ7Z3C6 839 aa22.96■■□□□ 1.27
COL1A1-206ENST00000485870 CERS5Q8N5B7 392 aa22.96■■□□□ 1.27
COL1A1-206ENST00000485870 GNAI2P04899 355 aa22.95■■□□□ 1.26
COL1A1-206ENST00000485870 PUM3Q15397 648 aaKnown RBP22.95■■□□□ 1.26
COL1A1-206ENST00000485870 ANGEL2Q5VTE6 544 aaKnown RBP22.95■■□□□ 1.26
COL1A1-206ENST00000485870 VPS37DQ86XT2 251 aa22.95■■□□□ 1.26
COL1A1-206ENST00000485870 DZIP1LQ8IYY4 767 aaKnown RBP22.95■■□□□ 1.26
COL1A1-206ENST00000485870 TDRD7Q8NHU6 1098 aaKnown RBP22.95■■□□□ 1.26
COL1A1-206ENST00000485870 HDAC9Q9UKV0 1011 aa22.95■■□□□ 1.26
COL1A1-206ENST00000485870 SRGAP3O43295 1099 aa22.94■■□□□ 1.26
COL1A1-206ENST00000485870 CIAO1O76071 339 aa22.94■■□□□ 1.26
COL1A1-206ENST00000485870 RLBP1P12271 317 aa22.94■■□□□ 1.26
COL1A1-206ENST00000485870 CAVIN4Q5BKX8 364 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms