RNA–Protein interactions for RNA: ENST00000484910.1

RD3-202, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

TSL 1 (best)

Gene RD3, Length 3,070 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-202ENST00000484910 CASP7P55210 303 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
RD3-202ENST00000484910 STRCQ7RTU9 1775 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 JAK2O60674 1132 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 NR1I2O75469 434 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
RD3-202ENST00000484910 CHST3Q7LGC8 479 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 SIPA1L3O60292 1781 aaPredicted RBP13.44□□□□□ -0.26
RD3-202ENST00000484910 TNNT1P13805 278 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
RD3-202ENST00000484910 CCDC57Q2TAC2 916 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
RD3-202ENST00000484910 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 A0A087WWV3 80 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 H7C1W4 665 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
RD3-202ENST00000484910 A0A1B0GUL7 405 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 NAA30Q147X3 362 aaPredicted RBP13.43□□□□□ -0.26
RD3-202ENST00000484910 TM6SF1Q9BZW5 370 aa13.43□□□□□ -0.26
RD3-202ENST00000484910 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
RD3-202ENST00000484910 FILIP1Q7Z7B0 1213 aa13.42□□□□□ -0.26
RD3-202ENST00000484910 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 MAP4K1Q92918 833 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 STARD3NLO95772 234 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 HAND2P61296 217 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 BRF1Q92994 677 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.41□□□□□ -0.26
RD3-202ENST00000484910 V9GYY5 206 aaPredicted RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 USP42Q9H9J4 1324 aaKnown RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 BECN2A8MW95 431 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 KCNQ2O43526 872 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 GREM2Q9H772 168 aa13.41□□□□□ -0.26
RD3-202ENST00000484910 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
RD3-202ENST00000484910 COL15A1P39059 1388 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 HIP1O00291 1037 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 ZNF75DP51815 510 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 PDE4CQ08493 712 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 SCARF1Q14162 830 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 TTLL5Q6EMB2 1281 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 CEP126Q9P2H0 1117 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
RD3-202ENST00000484910 EYA2O00167 538 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 NPHP1O15259 732 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
RD3-202ENST00000484910 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
RD3-202ENST00000484910 STK11IPQ8N1F8 1099 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
RD3-202ENST00000484910 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.26
RD3-202ENST00000484910 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
RD3-202ENST00000484910 ARID5BQ14865 1188 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
RD3-202ENST00000484910 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 TAF5LO75529 589 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 ATP5JP18859 108 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
RD3-202ENST00000484910 PGBD1Q96JS3 809 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
RD3-202ENST00000484910 LDHAL6AQ6ZMR3 332 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
RD3-202ENST00000484910 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 Q6ZUG5 572 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
RD3-202ENST00000484910 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
RD3-202ENST00000484910 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
RD3-202ENST00000484910 DDB1Q16531 1140 aa13.38□□□□□ -0.27
RD3-202ENST00000484910 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
RD3-202ENST00000484910 ZNF609O15014 1411 aa13.37□□□□□ -0.27
RD3-202ENST00000484910 ELP1O95163 1332 aa13.37□□□□□ -0.27
RD3-202ENST00000484910 ITGA6P23229 1130 aa13.37□□□□□ -0.27
RD3-202ENST00000484910 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
RD3-202ENST00000484910 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
RD3-202ENST00000484910 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
RD3-202ENST00000484910 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
RD3-202ENST00000484910 XAGE2Q96GT9 111 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms