RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 NDUFA8P51970 172 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 NAT10Q9H0A0 1025 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 FPGT-TNNI3KV9GXZ4 949 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 NEDD4P46934 1319 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 PXDNQ92626 1479 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 LAMA4Q16363 1823 aa23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 BBXQ8WY36 941 aaPredicted RBP23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 MRPS27Q92552 414 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
RPUSD3-216ENST00000484134 SMC2O95347 1197 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 EXOSC10Q01780 885 aaKnown RBP23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 PLEKHO1Q53GL0 409 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 DBNDD2Q9BQY9 259 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 NEURL1BA8MQ27 555 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 BMS1Q14692 1282 aaKnown RBP23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 ATL3Q6DD88 541 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 KIAA1468Q9P260 1216 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.02■■□□□ 1.28
RPUSD3-216ENST00000484134 DDX58O95786 925 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 RFX5P48382 616 aaPredicted RBP23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 RIC3Q7Z5B4 369 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 USP54Q70EL1 1684 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 CCDC66A2RUB6 948 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 GCKRQ14397 625 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 FMNL2Q96PY5 1086 aa23.01■■□□□ 1.27
RPUSD3-216ENST00000484134 BIN1O00499 593 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 FDPSP14324 419 aaKnown RBP23■■□□□ 1.27
RPUSD3-216ENST00000484134 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
RPUSD3-216ENST00000484134 ADALQ6DHV7 355 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 OTUD7BQ6GQQ9 843 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 AGXT2Q9BYV1 514 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 COPRSQ9NQ92 184 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 NAP1L2Q9ULW6 460 aaPredicted RBP23■■□□□ 1.27
RPUSD3-216ENST00000484134 SFPQP23246 707 aaKnown RBP eCLIP23■■□□□ 1.27
RPUSD3-216ENST00000484134 PLA2G4AP47712 749 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 ARHGAP29Q52LW3 1261 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 CCDC150Q8NCX0 1101 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 RTEL1Q9NZ71 1219 aa23■■□□□ 1.27
RPUSD3-216ENST00000484134 PNMA6AP0CW24 399 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 PDIA3P30101 505 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 IRX5P78411 483 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 NCAPHQ15003 741 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 HAUS7Q99871 368 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 NOL10Q9BSC4 688 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 CLIC4Q9Y696 253 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 EID1Q9Y6B2 187 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 ABCC6O95255 1503 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 FANCGO15287 622 aa22.99■■□□□ 1.27
RPUSD3-216ENST00000484134 HMGB1P09429 215 aaKnown RBP22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 LINC00301Q8NCQ3 95 aa22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 GORABQ5T7V8 394 aa22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 BPIFA3Q9BQP9 254 aa22.98■■□□□ 1.27
RPUSD3-216ENST00000484134 ANKARQ7Z5J8 1434 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 CARMIL3Q8ND23 1372 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 A0A1W2PQ27 194 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 A0A1W2PQ64 194 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 A0A1W2PQD8 194 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 MYL6BP14649 208 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 TIGD1Q96MW7 591 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 MYD88Q99836 296 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 CYP2C19P33261 490 aa22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 GPHNQ9NQX3 736 aaPredicted RBP22.97■■□□□ 1.27
RPUSD3-216ENST00000484134 RFX7Q2KHR2 1363 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 ZRANB2O95218 330 aaKnown RBP eCLIP22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 KCNJ6P48051 423 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 NFAT5O94916 1531 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 E7EWF7 191 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 ETF1P62495 437 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 KBTBD3Q8NAB2 608 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 XAGE3Q8WTP9 111 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 HSD3B7Q9H2F3 369 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 DNAI1Q9UI46 699 aa22.96■■□□□ 1.27
RPUSD3-216ENST00000484134 POLR3DP05423 398 aaPredicted RBP22.95■■□□□ 1.26
RPUSD3-216ENST00000484134 ATP1A3P13637 1013 aa22.95■■□□□ 1.26
RPUSD3-216ENST00000484134 TRIM65Q6PJ69 517 aa22.95■■□□□ 1.26
RPUSD3-216ENST00000484134 SH3TC1Q8TE82 1336 aa22.95■■□□□ 1.26
RPUSD3-216ENST00000484134 LMOD1P29536 600 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 AMOTQ4VCS5 1084 aa22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 ISM2Q6H9L7 571 aa22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 HOMER1Q86YM7 354 aa22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 ORC3Q9UBD5 711 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 KCNA6P17658 529 aa22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 FAM193AP78312 1265 aa22.94■■□□□ 1.26
RPUSD3-216ENST00000484134 SLC3A2P08195 630 aaKnown RBP22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 NLRP12P59046 1061 aa22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 NEXNQ0ZGT2 675 aa22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 SLC39A6Q13433 755 aa22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 STK38Q15208 465 aa22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 COPS6Q7L5N1 327 aa22.93■■□□□ 1.26
RPUSD3-216ENST00000484134 ZNF274Q96GC6 653 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms