RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PRMT3O60678 531 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 FSTP19883 344 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 C16orf46Q6P387 395 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 UBXN4Q92575 508 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 SAP130Q9H0E3 1048 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 FAM13BQ9NYF5 915 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 TRIM33Q9UPN9 1127 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
PTCD3-214ENST00000483925 UBAP1LF5GYI3 381 aa6.6□□□□□ -1.35
PTCD3-214ENST00000483925 OCLNQ16625 522 aa6.6□□□□□ -1.35
PTCD3-214ENST00000483925 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
PTCD3-214ENST00000483925 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
PTCD3-214ENST00000483925 COL26A1Q96A83 441 aa6.6□□□□□ -1.35
PTCD3-214ENST00000483925 BIN2Q9UBW5 565 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-214ENST00000483925 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
PTCD3-214ENST00000483925 TRIP4Q15650 581 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-214ENST00000483925 Q6ZS46 218 aa6.59□□□□□ -1.35
PTCD3-214ENST00000483925 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
PTCD3-214ENST00000483925 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
PTCD3-214ENST00000483925 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
PTCD3-214ENST00000483925 FNDC3AQ9Y2H6 1198 aaKnown RBP6.59□□□□□ -1.35
PTCD3-214ENST00000483925 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-214ENST00000483925 GLB1P16278 677 aa6.58□□□□□ -1.36
PTCD3-214ENST00000483925 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
PTCD3-214ENST00000483925 HYAL2Q12891 473 aa6.58□□□□□ -1.36
PTCD3-214ENST00000483925 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
PTCD3-214ENST00000483925 CLP1Q92989 425 aaKnown RBP6.58□□□□□ -1.36
PTCD3-214ENST00000483925 LINC01387J3KSC0 135 aa6.57□□□□□ -1.36
PTCD3-214ENST00000483925 GSC2O15499 205 aa6.57□□□□□ -1.36
PTCD3-214ENST00000483925 PTCD1O75127 700 aaKnown RBP6.57□□□□□ -1.36
PTCD3-214ENST00000483925 SMNDC1O75940 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTCD3-214ENST00000483925 NOM1Q5C9Z4 860 aaKnown RBP6.57□□□□□ -1.36
PTCD3-214ENST00000483925 FAM26DQ5JW98 314 aa6.57□□□□□ -1.36
PTCD3-214ENST00000483925 TTC39BQ5VTQ0 682 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-214ENST00000483925 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.57□□□□□ -1.36
PTCD3-214ENST00000483925 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
PTCD3-214ENST00000483925 RAXQ9Y2V3 346 aa6.57□□□□□ -1.36
PTCD3-214ENST00000483925 TNFRSF10BO14763 440 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 SSTR4P31391 388 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 SCNN1AP37088 669 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 NAA30Q147X3 362 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-214ENST00000483925 COL13A1Q5TAT6 717 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-214ENST00000483925 CEP135Q66GS9 1140 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 GALNT11Q8NCW6 608 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 CXXC1Q9P0U4 656 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-214ENST00000483925 STOML1Q9UBI4 398 aa6.56□□□□□ -1.36
PTCD3-214ENST00000483925 PPP1R1BQ9UD71 204 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-214ENST00000483925 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 CDC27P30260 824 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 CD68P34810 354 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-214ENST00000483925 ZAP70P43403 619 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 SERPINB4P48594 390 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 ATP11AP98196 1134 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 NAALADL2Q58DX5 795 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 ANKRD13AQ8IZ07 590 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-214ENST00000483925 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 MKNK1Q9BUB5 465 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 CEP41Q9BYV8 373 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 CADPSQ9ULU8 1353 aa6.55□□□□□ -1.36
PTCD3-214ENST00000483925 DHX15O43143 795 aaKnown RBP6.54□□□□□ -1.36
PTCD3-214ENST00000483925 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
PTCD3-214ENST00000483925 CD97P48960 835 aa6.54□□□□□ -1.36
PTCD3-214ENST00000483925 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
PTCD3-214ENST00000483925 GPR152Q8TDT2 470 aa6.54□□□□□ -1.36
PTCD3-214ENST00000483925 ABI2Q9NYB9 513 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-214ENST00000483925 STIM2Q9P246 746 aa6.54□□□□□ -1.36
PTCD3-214ENST00000483925 KIF4AO95239 1232 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 KLHL23Q8NBE8 558 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 RASSF4Q9H2L5 321 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 KCNK4Q9NYG8 393 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 EGFL7Q9UHF1 273 aa6.53□□□□□ -1.36
PTCD3-214ENST00000483925 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 FSCN2O14926 492 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 WISP1O95388 367 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 CDC25BP30305 580 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 COL19A1Q14993 1142 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 DUOXA2Q1HG44 320 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 NCAPG2Q86XI2 1143 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 ARMC10Q8N2F6 343 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 ABTB2Q8N961 1025 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
PTCD3-214ENST00000483925 TM4SF5O14894 197 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 ZBTB39O15060 712 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 COBLO75128 1261 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 PTPRAP18433 802 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 FBXO33Q7Z6M2 555 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-214ENST00000483925 CEP120Q8N960 986 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
PTCD3-214ENST00000483925 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms