RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ANKRD24Q8TF21 1146 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 ELP1O95163 1332 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 SCOCQ9UIL1 159 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 GOLGA8KD6RF30 607 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 DNAJC8O75937 253 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 ATP1A2P50993 1020 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 UBA5Q9GZZ9 404 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 IMPACTQ9P2X3 320 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 HSP90AA5PQ58FG0 334 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 ZNF215Q9UL58 517 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 IRX4P78413 519 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 SATB2Q9UPW6 733 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 UTP11Q9Y3A2 253 aaKnown RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 IFT88Q13099 833 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 GSTA5Q7RTV2 222 aa11.56□□□□□ -0.56
COL12A1-207ENST00000483888 SDCCAG8Q86SQ7 713 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 KRI1Q8N9T8 703 aaKnown RBP11.56□□□□□ -0.56
COL12A1-207ENST00000483888 PRPHP41219 470 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 CCDC26Q8TAB7 109 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL12A1-207ENST00000483888 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 ATP2A1O14983 1001 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 TERF2Q15554 542 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 MRPS27Q92552 414 aaKnown RBP11.55□□□□□ -0.56
COL12A1-207ENST00000483888 FAM204AQ9H8W3 233 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 SYTL4Q96C24 671 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-207ENST00000483888 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 PPFIA4O75335 1185 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 UBXN1Q04323 297 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 TTC19Q6DKK2 380 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-207ENST00000483888 NCAPGQ9BPX3 1015 aa11.55□□□□□ -0.56
COL12A1-207ENST00000483888 CUX1P39880 1505 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 CNGA4Q8IV77 575 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 Q9H521 79 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 GLRX3O76003 335 aaKnown RBP11.54□□□□□ -0.56
COL12A1-207ENST00000483888 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
COL12A1-207ENST00000483888 PSMD6Q15008 389 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 EFCAB8A8MWE9 144 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 PRKAR2BP31323 418 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 JAKMIP2Q96AA8 810 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-207ENST00000483888 LMBR1Q8WVP7 490 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 SPDL1Q96EA4 605 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 BAG2O95816 211 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 CENPKQ9BS16 269 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 RMND1Q9NWS8 449 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 MGEA5O60502 916 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 PCYT1AP49585 367 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 TTC22Q5TAA0 569 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
COL12A1-207ENST00000483888 PYM1Q9BRP8 204 aaKnown RBP11.54□□□□□ -0.56
COL12A1-207ENST00000483888 YIPF3Q9GZM5 350 aa11.54□□□□□ -0.56
COL12A1-207ENST00000483888 FHOD3Q2V2M9 1422 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL12A1-207ENST00000483888 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 SMC1BQ8NDV3 1235 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
COL12A1-207ENST00000483888 AFMP43652 599 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 TAF11Q15544 211 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
COL12A1-207ENST00000483888 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 NUB1Q9Y5A7 615 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-207ENST00000483888 RRAGBQ5VZM2 374 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 AKAP2Q9Y2D5 859 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 SAMM50Q9Y512 469 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 TRPC3Q13507 836 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 TCERG1LQ5VWI1 586 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 TBC1D5Q92609 795 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
COL12A1-207ENST00000483888 NUCB1Q02818 461 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 USP16Q9Y5T5 823 aa11.53□□□□□ -0.56
COL12A1-207ENST00000483888 FCHSD2O94868 740 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL12A1-207ENST00000483888 MX2P20592 715 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 SND1Q7KZF4 910 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL12A1-207ENST00000483888 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 TCP11Q8WWU5 503 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 CHMP2AO43633 222 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 BICC1Q9H694 974 aaKnown RBP11.52□□□□□ -0.56
COL12A1-207ENST00000483888 EXOC4Q96A65 974 aa11.52□□□□□ -0.56
COL12A1-207ENST00000483888 TTF2Q9UNY4 1162 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms