RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 LTBP1Q14766 1721 aa15.19■□□□□ 0.02
TSPAN1-208ENST00000482928 ZNF609O15014 1411 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 RIC1Q4ADV7 1423 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 A0A1B0GUL7 405 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 GLTPD2A6NH11 291 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 SDSP20132 328 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 FXR1P51114 621 aaKnown RBP eCLIP15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 TGFB2P61812 414 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 ATP2B3Q16720 1220 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
TSPAN1-208ENST00000482928 MMP10P09238 476 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 SLC5A1P13866 664 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 DDR1Q08345 913 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 PUM3Q15397 648 aaKnown RBP15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 TTC39AQ5SRH9 613 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
TSPAN1-208ENST00000482928 TMEM88BA6NKF7 163 aa15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 DBNDD2Q9BQY9 259 aa15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 DBNLQ9UJU6 430 aaKnown RBP15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 CCDC88AQ3V6T2 1871 aa15.16■□□□□ 0.02
TSPAN1-208ENST00000482928 PDE8BO95263 885 aa15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 MAP4K4O95819 1239 aaPredicted RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 KCNJ4P48050 445 aa15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 MFAP1P55081 439 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 TIMM10P62072 90 aa15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 RPS8P62241 208 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 RBM19Q9Y4C8 960 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-208ENST00000482928 ATP5JP18859 108 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 PDE6BP35913 854 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 TBC1D9Q6ZT07 1266 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 LPIN2Q92539 896 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 EVI5LQ96CN4 794 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 ANKRD2Q9GZV1 360 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.14■□□□□ 0.01
TSPAN1-208ENST00000482928 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 CHRNDQ07001 517 aa15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 GRAPQ13588 217 aa15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 DEFB115Q30KQ5 88 aa15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 CELF1Q92879 486 aaKnown RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
TSPAN1-208ENST00000482928 AK9Q5TCS8 1911 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 HIP1O00291 1037 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 DPEP1P16444 411 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 FSD1Q9BTV5 496 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 PASKQ96RG2 1323 aa15.12■□□□□ 0.01
TSPAN1-208ENST00000482928 TAF5LO75529 589 aa15.11■□□□□ 0.01
TSPAN1-208ENST00000482928 UQCRFS1P1P0C7P4 283 aa15.11■□□□□ 0.01
TSPAN1-208ENST00000482928 MPNDQ8N594 471 aa15.11■□□□□ 0.01
TSPAN1-208ENST00000482928 VGLL2Q8N8G2 317 aa15.11■□□□□ 0.01
TSPAN1-208ENST00000482928 RUFY2Q8WXA3 655 aa15.11■□□□□ 0.01
TSPAN1-208ENST00000482928 RASSF10A6NK89 507 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 REC8O95072 547 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 ADORA1P30542 326 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 VPS37DQ86XT2 251 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 GNL3LQ9NVN8 582 aaKnown RBP15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 ANKIB1Q9P2G1 1089 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
TSPAN1-208ENST00000482928 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 POTECB2RU33 542 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 BBOX1O75936 387 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 NPR1P16066 1061 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 ALDH1B1P30837 517 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 UBE4AQ14139 1066 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 CAVIN4Q5BKX8 364 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 HAUS7Q99871 368 aa15.09■□□□□ 0.01
TSPAN1-208ENST00000482928 H0YIN7 160 aa15.08■□□□□ 0
TSPAN1-208ENST00000482928 POTEIP0CG38 1075 aa15.08■□□□□ 0
TSPAN1-208ENST00000482928 POTEJP0CG39 1038 aa15.08■□□□□ 0
TSPAN1-208ENST00000482928 CHMLP26374 656 aa15.08■□□□□ 0
TSPAN1-208ENST00000482928 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
TSPAN1-208ENST00000482928 PAG1Q9NWQ8 432 aa15.08■□□□□ 0
TSPAN1-208ENST00000482928 ARAP2Q8WZ64 1704 aa15.07■□□□□ 0
TSPAN1-208ENST00000482928 GOLIM4O00461 696 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms