RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 FBXO33Q7Z6M2 555 aa9.7□□□□□ -0.86
TVP23B-203ENST00000482741 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
TVP23B-203ENST00000482741 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
TVP23B-203ENST00000482741 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 SH3BP5O60239 455 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 HYPKQ9NX55 129 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■■□ 23.3
TVP23B-203ENST00000482741 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 EVA1CP58658 441 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 HSP90AB4PQ58FF6 505 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
TVP23B-203ENST00000482741 FAM43BQ6ZT52 329 aaPredicted RBP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 WDR75Q8IWA0 830 aaKnown RBP9.69□□□□□ -0.86
TVP23B-203ENST00000482741 TLDC2A0PJX2 215 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
TVP23B-203ENST00000482741 RRP1P56182 461 aaKnown RBP9.68□□□□□ -0.86
TVP23B-203ENST00000482741 TMTC2Q8N394 836 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 MAPK8IP3Q9UPT6 1336 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 A0A087WZG4 1122 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 RASA1P20936 1047 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 NT5C2P49902 561 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
TVP23B-203ENST00000482741 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 GPR108Q9NPR9 543 aa9.68□□□□□ -0.86
TVP23B-203ENST00000482741 CREB3O43889 395 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 MAPK8P45983 427 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 ILDR2Q71H61 639 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 COL1A1P02452 1464 aaPredicted RBP9.67□□□□□ -0.86
TVP23B-203ENST00000482741 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 RIPK4P57078 832 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 ZNF394Q53GI3 561 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
TVP23B-203ENST00000482741 USP17L2Q6R6M4 530 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 GPATCH11Q8N954 259 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 OSBPL3Q9H4L5 887 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 PALLDQ8WX93 1383 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 CCDC194A0A1B0GVG4 234 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 KIF4AO95239 1232 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
TVP23B-203ENST00000482741 TSR2Q969E8 191 aaKnown RBP9.67□□□□□ -0.86
TVP23B-203ENST00000482741 SKIP12755 728 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
TVP23B-203ENST00000482741 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 APAF1O14727 1248 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 JDP2Q8WYK2 163 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
TVP23B-203ENST00000482741 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.86
TVP23B-203ENST00000482741 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 RAVER1Q8IY67 606 aaKnown RBP9.65□□□□□ -0.86
TVP23B-203ENST00000482741 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 MPHOSPH6Q99547 160 aaKnown RBP9.65□□□□□ -0.86
TVP23B-203ENST00000482741 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
TVP23B-203ENST00000482741 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 FMNL2Q96PY5 1086 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 API5Q9BZZ5 524 aaKnown RBP9.65□□□□□ -0.86
TVP23B-203ENST00000482741 COL4A3BPQ9Y5P4 624 aa9.65□□□□□ -0.86
TVP23B-203ENST00000482741 CSF1RP07333 972 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 PTMSP20962 102 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.87
TVP23B-203ENST00000482741 NR6A1Q15406 480 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 FLAD1Q8NFF5 587 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 NGLY1Q96IV0 654 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 TINF2Q9BSI4 451 aa9.65□□□□□ -0.87
TVP23B-203ENST00000482741 ZNF236Q9UL36 1845 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 IBSPP21815 317 aaPredicted RBP9.64□□□□□ -0.87
TVP23B-203ENST00000482741 NCOA4Q13772 614 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 ZBTB40Q9NUA8 1239 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 CIAO1O76071 339 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 CCT4P50991 539 aaKnown RBP9.64□□□□□ -0.87
TVP23B-203ENST00000482741 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
TVP23B-203ENST00000482741 USP21Q9UK80 565 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 ATAD5Q96QE3 1844 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 ATP9BO43861 1147 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 CCDC30Q5VVM6 783 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
TVP23B-203ENST00000482741 SYMPKQ92797 1274 aaKnown RBP9.64□□□□□ -0.87
TVP23B-203ENST00000482741 H7C1W4 665 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 HOXA2O43364 376 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
TVP23B-203ENST00000482741 FOXK1P85037 733 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
TVP23B-203ENST00000482741 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 KCNB2Q92953 911 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms