RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 Q6ZUG5 572 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 STOX1Q6ZVD7 989 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 HAUS7Q99871 368 aa17.6■□□□□ 0.41
ATG4B-220ENST00000482507 LOC102724428A0A0B4J2F2 783 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 DYNC1I1O14576 645 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 SIK1P57059 783 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 SPTLC3Q9NUV7 552 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 LUZP1Q86V48 1076 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
ATG4B-220ENST00000482507 RESTQ13127 1097 aa17.58■□□□□ 0.41
ATG4B-220ENST00000482507 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.41
ATG4B-220ENST00000482507 BRF1Q92994 677 aa17.58■□□□□ 0.41
ATG4B-220ENST00000482507 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.41
ATG4B-220ENST00000482507 PALLDQ8WX93 1383 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 TRIM37O94972 964 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
ATG4B-220ENST00000482507 FOXO4P98177 505 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 ITPK1Q13572 414 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 KRT32Q14532 448 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 FAM200AQ8TCP9 573 aa17.58■□□□□ 0.4
ATG4B-220ENST00000482507 NR1I2O75469 434 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
ATG4B-220ENST00000482507 TSC1Q92574 1164 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 U3KPZ7 1027 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-220ENST00000482507 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-220ENST00000482507 SCRN1Q12765 414 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 ATG9AQ7Z3C6 839 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-220ENST00000482507 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 TNMDQ9H2S6 317 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 RFX7Q2KHR2 1363 aa17.57■□□□□ 0.4
ATG4B-220ENST00000482507 STARD3NLO95772 234 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 RBM43Q6ZSC3 357 aaKnown RBP17.56■□□□□ 0.4
ATG4B-220ENST00000482507 MYRIPQ8NFW9 859 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 ANO6Q4KMQ2 910 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 KIAA1524Q8TCG1 905 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 CLSTN2Q9H4D0 955 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
ATG4B-220ENST00000482507 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
ATG4B-220ENST00000482507 ZBTB1Q9Y2K1 713 aa17.55■□□□□ 0.4
ATG4B-220ENST00000482507 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 GOLIM4O00461 696 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 CTDNEP1O95476 244 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 TIMM10P62072 90 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
ATG4B-220ENST00000482507 H7C1W4 665 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
ATG4B-220ENST00000482507 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-220ENST00000482507 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
ATG4B-220ENST00000482507 FOSBP53539 338 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-220ENST00000482507 NEUROD6Q96NK8 337 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATG4B-220ENST00000482507 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
ATG4B-220ENST00000482507 PTGS1P23219 599 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 NSUN7Q8NE18 718 aaKnown RBP17.52■□□□□ 0.4
ATG4B-220ENST00000482507 PFKFB2O60825 505 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
ATG4B-220ENST00000482507 LAMA4Q16363 1823 aa17.52■□□□□ 0.39
ATG4B-220ENST00000482507 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.39
ATG4B-220ENST00000482507 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 CEBPZQ03701 1054 aaKnown RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 ZNF594Q96JF6 807 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 PRIMPOLQ96LW4 560 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 BCL11BQ9C0K0 894 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 H3BQV1 296 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
ATG4B-220ENST00000482507 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
ATG4B-220ENST00000482507 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
ATG4B-220ENST00000482507 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 DNAJC25Q9H1X3 360 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 NRBP1Q9UHY1 535 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
ATG4B-220ENST00000482507 ZMYM1Q5SVZ6 1142 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
ATG4B-220ENST00000482507 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms