RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 HIRAP54198 1017 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-213ENST00000482192 SAMD7Q7Z3H4 446 aa14.93□□□□□ -0.02
HMGN1-213ENST00000482192 HELBQ8NG08 1087 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-213ENST00000482192 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
HMGN1-213ENST00000482192 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
HMGN1-213ENST00000482192 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
HMGN1-213ENST00000482192 TBC1D10BQ4KMP7 808 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-213ENST00000482192 C15orf52Q6ZUT6 534 aaKnown RBP14.92□□□□□ -0.02
HMGN1-213ENST00000482192 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
HMGN1-213ENST00000482192 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
HMGN1-213ENST00000482192 A0A1B0GUL6 1792 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 UBTFL1P0CB47 393 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-213ENST00000482192 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-213ENST00000482192 KIF4BQ2VIQ3 1234 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 DACT2Q5SW24 774 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 STRIP1Q5VSL9 837 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 GMLQ99445 158 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 PSME4Q14997 1843 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 MROH5Q6ZUA9 1318 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
HMGN1-213ENST00000482192 SNAP23O00161 211 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 TRAF5O00463 557 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 PLIN1O60240 522 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 EGFRP00533 1210 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
HMGN1-213ENST00000482192 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
HMGN1-213ENST00000482192 CDC37L1Q7L3B6 337 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 FBXW7Q969H0 707 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 PUS3Q9BZE2 481 aaKnown RBP14.9□□□□□ -0.02
HMGN1-213ENST00000482192 CD209Q9NNX6 404 aa14.9□□□□□ -0.02
HMGN1-213ENST00000482192 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
HMGN1-213ENST00000482192 BCAR3O75815 825 aa14.89□□□□□ -0.03
HMGN1-213ENST00000482192 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-213ENST00000482192 GLIS2Q9BZE0 524 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-213ENST00000482192 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
HMGN1-213ENST00000482192 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
HMGN1-213ENST00000482192 TRIM27P14373 513 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 FMR1Q06787 632 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■□□□□ 10.3
HMGN1-213ENST00000482192 UBE4AQ14139 1066 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 TTLL5Q6EMB2 1281 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 ATF7IPQ6VMQ6 1270 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
HMGN1-213ENST00000482192 MYOZ2Q9NPC6 264 aa14.88□□□□□ -0.03
HMGN1-213ENST00000482192 ABT1Q9ULW3 272 aaKnown RBP14.88□□□□□ -0.03
HMGN1-213ENST00000482192 CEP350Q5VT06 3117 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 IL1R1P14778 569 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 MMP14P50281 582 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 GTF2IP78347 998 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 LRRC24Q50LG9 513 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 CST9Q5W186 159 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 KLHDC4Q8TBB5 520 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 MEIS3Q99687 375 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 MXD3Q9BW11 206 aa14.87□□□□□ -0.03
HMGN1-213ENST00000482192 RASSF10A6NK89 507 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 GNAI3P08754 354 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 KRT26Q7Z3Y9 468 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 USP48Q86UV5 1035 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 GGA3Q9NZ52 723 aa14.86□□□□□ -0.03
HMGN1-213ENST00000482192 LRRFIP2Q9Y608 721 aaKnown RBP14.86□□□□□ -0.03
HMGN1-213ENST00000482192 ZNF646O15015 1829 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-213ENST00000482192 EYA2O00167 538 aa14.85□□□□□ -0.03
HMGN1-213ENST00000482192 PDE8BO95263 885 aa14.85□□□□□ -0.03
HMGN1-213ENST00000482192 CELF2O95319 508 aaKnown RBP14.85□□□□□ -0.03
HMGN1-213ENST00000482192 RFX5P48382 616 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-213ENST00000482192 SCARF1Q14162 830 aa14.85□□□□□ -0.03
HMGN1-213ENST00000482192 SULF1Q8IWU6 871 aa14.85□□□□□ -0.03
HMGN1-213ENST00000482192 VGLL2Q8N8G2 317 aa14.85□□□□□ -0.03
HMGN1-213ENST00000482192 HIBADHP31937 336 aaKnown RBP14.84□□□□□ -0.03
HMGN1-213ENST00000482192 GYG1P46976 350 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
HMGN1-213ENST00000482192 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 ANGEL2Q5VTE6 544 aaKnown RBP14.84□□□□□ -0.03
HMGN1-213ENST00000482192 KIAA0825Q8IV33 1275 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 ZNF408Q9H9D4 720 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 HDAC9Q9UKV0 1011 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 TLL2Q9Y6L7 1015 aa14.84□□□□□ -0.03
HMGN1-213ENST00000482192 ASTN2O75129 1339 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-213ENST00000482192 ADM5C9JUS6 153 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 CIAO1O76071 339 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 SASH1O94885 1247 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 VEGFBP49765 207 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 FKBP1AP62942 108 aaKnown RBP14.83□□□□□ -0.04
HMGN1-213ENST00000482192 PUM3Q15397 648 aaKnown RBP14.83□□□□□ -0.04
HMGN1-213ENST00000482192 CAVIN4Q5BKX8 364 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
HMGN1-213ENST00000482192 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-213ENST00000482192 PITPNM2Q9BZ72 1349 aa14.83□□□□□ -0.04
HMGN1-213ENST00000482192 SAPCD2Q86UD0 394 aa14.82□□□□□ -0.04
HMGN1-213ENST00000482192 VPS37DQ86XT2 251 aa14.82□□□□□ -0.04
HMGN1-213ENST00000482192 CERS5Q8N5B7 392 aa14.82□□□□□ -0.04
HMGN1-213ENST00000482192 TNNQ9UQP3 1299 aa14.82□□□□□ -0.04
HMGN1-213ENST00000482192 FAM205AQ6ZU69 1335 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms