RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 CARMIL2Q6F5E8 1435 aa4.53□□□□□ -1.68
USH2A-204ENST00000481786 FSCN2O14926 492 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 SART1O43290 800 aaKnown RBP4.52□□□□□ -1.69
USH2A-204ENST00000481786 EGFRP00533 1210 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 PRNPP04156 253 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 FOSL1P15407 271 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 JUNBP17275 347 aaPredicted RBP4.52□□□□□ -1.69
USH2A-204ENST00000481786 EPHA1P21709 976 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 LMOD1P29536 600 aaPredicted RBP4.52□□□□□ -1.69
USH2A-204ENST00000481786 CFAP70Q5T0N1 1121 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 HINFPQ9BQA5 517 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 LRFN2Q9ULH4 789 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 CC2D2AQ9P2K1 1620 aa4.52□□□□□ -1.69
USH2A-204ENST00000481786 HOXD8P13378 290 aaPredicted RBP4.51□□□□□ -1.69
USH2A-204ENST00000481786 ARID4AP29374 1257 aaPredicted RBP4.51□□□□□ -1.69
USH2A-204ENST00000481786 CDC27P30260 824 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 CEP135Q66GS9 1140 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 DCAF11Q8TEB1 546 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 MUC3BQ9H195 1237 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 RBSNQ9H1K0 784 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 C11orf16Q9NQ32 467 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 PAK6Q9NQU5 681 aaPredicted RBP4.51□□□□□ -1.69
USH2A-204ENST00000481786 ATG3Q9NT62 314 aa4.51□□□□□ -1.69
USH2A-204ENST00000481786 MAP4P27816 1152 aaKnown RBP4.5□□□□□ -1.69
USH2A-204ENST00000481786 ADMP35318 185 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 SOX18P35713 384 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 PTK7Q13308 1070 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 TRIP4Q15650 581 aaPredicted RBP4.5□□□□□ -1.69
USH2A-204ENST00000481786 CRTC2Q53ET0 693 aaPredicted RBP4.5□□□□□ -1.69
USH2A-204ENST00000481786 HGSNATQ68CP4 663 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 VSIG10LQ86VR7 867 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 FBXL18Q96ME1 805 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 OSBPL1AQ9BXW6 950 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 RASSF4Q9H2L5 321 aa4.5□□□□□ -1.69
USH2A-204ENST00000481786 BICRAQ9NZM4 1560 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 SEC13P55735 322 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 NLRP12P59046 1061 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 C11orf91Q3C1V1 193 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 LARP1Q6PKG0 1096 aaKnown RBP4.49□□□□□ -1.69
USH2A-204ENST00000481786 TREML1Q86YW5 311 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 FLCNQ8NFG4 579 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 VRTNQ9H8Y1 702 aa4.49□□□□□ -1.69
USH2A-204ENST00000481786 FAM196BA6NMK8 535 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L15C9J2P7 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L10C9JJH3 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L13C9JLJ4 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L12C9JPN9 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L11C9JVI0 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L21D6R901 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L18D6R9N7 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L22D6RA61 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L17D6RBQ6 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L19D6RCP7 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L20D6RJB6 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 IGFBP4P22692 258 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 RXRBP28702 533 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 USP17L24Q0WX57 530 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 DPYDQ12882 1025 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 KLHL23Q8NBE8 558 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 RBM19Q9Y4C8 960 aaKnown RBP4.48□□□□□ -1.69
USH2A-204ENST00000481786 SHROOM4Q9ULL8 1493 aa4.48□□□□□ -1.69
USH2A-204ENST00000481786 FAM170BA6NMN3 283 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 CYP26A1O43174 497 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 RFX1P22670 979 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 SRPK2P78362 688 aaKnown RBP4.47□□□□□ -1.69
USH2A-204ENST00000481786 CDCA8Q53HL2 280 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 FAM26DQ5JW98 314 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 ANKRD34AQ69YU3 496 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 ZNF574Q6ZN55 896 aaPredicted RBP4.47□□□□□ -1.69
USH2A-204ENST00000481786 WFDC3Q8IUB2 231 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 ANKMY2Q8IV38 441 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 CACTIN-AS1Q8N1I8 211 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 ARXQ96QS3 562 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 SEC31BQ9NQW1 1179 aa4.47□□□□□ -1.69
USH2A-204ENST00000481786 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
USH2A-204ENST00000481786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.47□□□□□ -1.69
USH2A-204ENST00000481786 ARID3CA6NKF2 412 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 GAS2O43903 313 aaKnown RBP4.46□□□□□ -1.7
USH2A-204ENST00000481786 CYP2E1P05181 493 aaPredicted RBP4.46□□□□□ -1.7
USH2A-204ENST00000481786 DRD2P14416 443 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 NFKBIBQ15653 356 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 CDPF1Q6NVV7 123 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 FDX2Q6P4F2 183 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 C14orf37Q86TY3 774 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 NLRP13Q86W25 1043 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 OR13H1Q8NG92 308 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 FBLIM1Q8WUP2 373 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 POP1Q99575 1024 aaKnown RBP4.46□□□□□ -1.7
USH2A-204ENST00000481786 RUSC1Q9BVN2 902 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 RNF208Q9H0X6 261 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 ZC3H7BQ9UGR2 993 aaKnown RBP4.46□□□□□ -1.7
USH2A-204ENST00000481786 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
USH2A-204ENST00000481786 SMNDC1O75940 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
USH2A-204ENST00000481786 BUD31P41223 144 aaPredicted RBP4.45□□□□□ -1.7
USH2A-204ENST00000481786 CILP2Q8IUL8 1156 aa4.45□□□□□ -1.7
USH2A-204ENST00000481786 ETFBKMTQ8IXQ9 262 aa4.45□□□□□ -1.7
USH2A-204ENST00000481786 GATA6Q92908 595 aa4.45□□□□□ -1.7
USH2A-204ENST00000481786 MYO19Q96H55 970 aa4.45□□□□□ -1.7
USH2A-204ENST00000481786 C1orf115Q9H7X2 142 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms