RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-216ENST00000481048 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 CPDO75976 1380 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 DISP2A7MBM2 1401 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
LRCH3-216ENST00000481048 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
LRCH3-216ENST00000481048 TLR1Q15399 786 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
LRCH3-216ENST00000481048 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-216ENST00000481048 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-216ENST00000481048 THRAP3Q9Y2W1 955 aaKnown RBP9.25□□□□□ -0.93
LRCH3-216ENST00000481048 GCP02774 474 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 BMP4P12644 408 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 IRF5Q13568 498 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 CHRNA2Q15822 529 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 ABHD17AQ96GS6 310 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 USP19O94966 1318 aa9.24□□□□□ -0.93
LRCH3-216ENST00000481048 PPIP5K1Q6PFW1 1433 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 GOLGA6L1Q8N7Z2 621 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 LRP5O75197 1615 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
LRCH3-216ENST00000481048 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 C2CD2LO14523 706 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 BNIP3LO60238 219 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 PROCP04070 461 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 FGFR3P22607 806 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 VAC14Q08AM6 782 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 TCP11L2Q8N4U5 519 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 CAMTA1Q9Y6Y1 1673 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 PARD3Q8TEW0 1356 aa9.22□□□□□ -0.93
LRCH3-216ENST00000481048 NRKQ7Z2Y5 1582 aa9.21□□□□□ -0.93
LRCH3-216ENST00000481048 KAT6BQ8WYB5 2073 aa9.21□□□□□ -0.93
LRCH3-216ENST00000481048 AMPD1P23109 780 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 PLA2G4AP47712 749 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 CTBSQ01459 385 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
LRCH3-216ENST00000481048 TNS1Q9HBL0 1735 aaKnown RBP9.21□□□□□ -0.94
LRCH3-216ENST00000481048 ADAM23O75077 832 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
LRCH3-216ENST00000481048 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 NDFIP2Q9NV92 336 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 USP6P35125 1406 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 TRPM1Q7Z4N2 1603 aa9.2□□□□□ -0.94
LRCH3-216ENST00000481048 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 TRIM37O94972 964 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 SCNN1DP51172 638 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 GDF10P55107 478 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 KCNH5Q8NCM2 988 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
LRCH3-216ENST00000481048 PARP4Q9UKK3 1724 aaKnown RBP9.19□□□□□ -0.94
LRCH3-216ENST00000481048 APBA3O96018 575 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 INHAP05111 366 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 COL5A2P05997 1499 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-216ENST00000481048 COL8A1P27658 744 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 CRB1P82279 1406 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
LRCH3-216ENST00000481048 FIGNL1Q6PIW4 674 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 SLCO4C1Q6ZQN7 724 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 TTC21AQ8NDW8 1320 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 GDPD2Q9HCC8 539 aa9.18□□□□□ -0.94
LRCH3-216ENST00000481048 COL18A1P39060 1754 aa9.17□□□□□ -0.94
LRCH3-216ENST00000481048 SLIT3O75094 1523 aa9.17□□□□□ -0.94
LRCH3-216ENST00000481048 ROCK2O75116 1388 aaKnown RBP9.17□□□□□ -0.94
LRCH3-216ENST00000481048 ABL2P42684 1182 aa9.17□□□□□ -0.94
LRCH3-216ENST00000481048 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
LRCH3-216ENST00000481048 ZCCHC2Q9C0B9 1178 aaKnown RBP9.17□□□□□ -0.94
LRCH3-216ENST00000481048 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
LRCH3-216ENST00000481048 RGPD5Q99666 1765 aa9.17□□□□□ -0.94
LRCH3-216ENST00000481048 PLSCR1O15162 318 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 R3HDM1Q15032 1099 aaKnown RBP9.16□□□□□ -0.94
LRCH3-216ENST00000481048 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 ALYREFQ86V81 257 aaKnown RBP9.16□□□□□ -0.94
LRCH3-216ENST00000481048 PLPP7Q8NBV4 271 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 SIN3AQ96ST3 1273 aa9.16□□□□□ -0.94
LRCH3-216ENST00000481048 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
LRCH3-216ENST00000481048 CPSF1Q10570 1443 aaKnown RBP9.15□□□□□ -0.94
LRCH3-216ENST00000481048 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 TTC21BQ7Z4L5 1316 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 WDR17Q8IZU2 1322 aa9.15□□□□□ -0.94
LRCH3-216ENST00000481048 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms