RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 NPATQ14207 1427 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 SEC24BO95487 1268 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 IFIT5Q13325 482 aaKnown RBP10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 TAF12Q16514 161 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 LMBRD1Q9NUN5 540 aa10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 CPSF1Q10570 1443 aaKnown RBP10.6□□□□□ -0.71
CACNA1C-225ENST00000480911 LDHCP07864 332 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 CCDC178Q5BJE1 867 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 RPUSD2Q8IZ73 545 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 SHTN1A0MZ66 631 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 CCDC69A6NI79 296 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 AKAP2Q9Y2D5 859 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 PHAXQ9H814 394 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 DBF4Q9UBU7 674 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-225ENST00000480911 SEPT8Q92599 483 aa10.58□□□□□ -0.71
CACNA1C-225ENST00000480911 ZNF165P49910 485 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 SPC24Q8NBT2 197 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 PUF60Q9UHX1 559 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 GCOM1H8Y6P7 765 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 GRIN3BO60391 1043 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 MYZAPP0CAP1 466 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 ZNF397Q8NF99 534 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 FAM184BQ9ULE4 1060 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 DCPSQ96C86 337 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 MYD88Q99836 296 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 USP19O94966 1318 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 A0A1W2PP64 1363 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 CHL1O00533 1208 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 ATP2C2O75185 946 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 GSTO1P78417 241 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 C6orf163Q5TEZ5 329 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 PDLIM2Q96JY6 352 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
CACNA1C-225ENST00000480911 BANK1Q8NDB2 785 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 KANK3Q6NY19 840 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 CLIP2Q9UDT6 1046 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 CEP131Q9UPN4 1083 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 DNA2P51530 1060 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 CUL4AQ13619 759 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 SREK1Q8WXA9 508 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 BMP15O95972 392 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 ATP6V1E1P36543 226 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 LLPHQ9BRT6 129 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
CACNA1C-225ENST00000480911 A6NNZ2 444 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 MXRA7P84157 204 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 MAP7D1Q3KQU3 841 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 TUBB8Q3ZCM7 444 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 ERO1AQ96HE7 468 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 ORAI2Q96SN7 254 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 ZBTB3Q9H5J0 574 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 JCADQ9P266 1359 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 B4DLN1 442 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 GCP02774 474 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 MRPL12P52815 198 aaKnown RBP10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 SIL1Q9H173 461 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 PFDN4Q9NQP4 134 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 FLT4P35916 1363 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 SNX16P57768 344 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 SKAP1Q86WV1 359 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 ATP7BP35670 1465 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 RGS12O14924 1447 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 CHMLP26374 656 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 KCNG4Q8TDN1 519 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 IMPACTQ9P2X3 320 aa10.56□□□□□ -0.72
CACNA1C-225ENST00000480911 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms