RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 PTPN12Q05209 780 aaKnown RBP14.63□□□□□ -0.07
TTC28-206ENST00000480563 PRKG1Q13976 671 aa14.63□□□□□ -0.07
TTC28-206ENST00000480563 ARMC9Q7Z3E5 817 aa14.63□□□□□ -0.07
TTC28-206ENST00000480563 FBXW7Q969H0 707 aa14.63□□□□□ -0.07
TTC28-206ENST00000480563 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
TTC28-206ENST00000480563 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
TTC28-206ENST00000480563 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
TTC28-206ENST00000480563 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
TTC28-206ENST00000480563 MINPP1Q9UNW1 487 aa14.62□□□□□ -0.07
TTC28-206ENST00000480563 MYO3BQ8WXR4 1341 aa14.62□□□□□ -0.07
TTC28-206ENST00000480563 MED23Q9ULK4 1368 aa14.61□□□□□ -0.07
TTC28-206ENST00000480563 ELL2O00472 640 aaPredicted RBP14.61□□□□□ -0.07
TTC28-206ENST00000480563 SASH1O94885 1247 aa14.61□□□□□ -0.07
TTC28-206ENST00000480563 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
TTC28-206ENST00000480563 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
TTC28-206ENST00000480563 METTL22Q9BUU2 404 aaPredicted RBP14.61□□□□□ -0.07
TTC28-206ENST00000480563 COA1Q9GZY4 146 aa14.61□□□□□ -0.07
TTC28-206ENST00000480563 BSDC1Q9NW68 430 aaPredicted RBP14.61□□□□□ -0.07
TTC28-206ENST00000480563 ALDH1A1P00352 501 aa14.6□□□□□ -0.07
TTC28-206ENST00000480563 MMP14P50281 582 aa14.6□□□□□ -0.07
TTC28-206ENST00000480563 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
TTC28-206ENST00000480563 CTSWP56202 376 aa14.6□□□□□ -0.07
TTC28-206ENST00000480563 WDR43Q15061 677 aaKnown RBP eCLIP14.6□□□□□ -0.07
TTC28-206ENST00000480563 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
TTC28-206ENST00000480563 TTLL11Q8NHH1 800 aa14.6□□□□□ -0.07
TTC28-206ENST00000480563 ANGEL1Q9UNK9 670 aaKnown RBP14.6□□□□□ -0.07
TTC28-206ENST00000480563 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
TTC28-206ENST00000480563 ZNF853P0CG23 659 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 INHBEP58166 350 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 TTLL5Q6EMB2 1281 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 TXNRD3Q86VQ6 643 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
TTC28-206ENST00000480563 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 PSME4Q14997 1843 aa14.59□□□□□ -0.07
TTC28-206ENST00000480563 MANSC4A6NHS7 340 aaPredicted RBP14.58□□□□□ -0.08
TTC28-206ENST00000480563 HABP4Q5JVS0 413 aaKnown RBP14.58□□□□□ -0.08
TTC28-206ENST00000480563 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.08
TTC28-206ENST00000480563 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.08
TTC28-206ENST00000480563 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
TTC28-206ENST00000480563 GREM2Q9H772 168 aa14.58□□□□□ -0.08
TTC28-206ENST00000480563 FZD1Q9UP38 647 aa14.58□□□□□ -0.08
TTC28-206ENST00000480563 LEMD3Q9Y2U8 911 aa14.58□□□□□ -0.08
TTC28-206ENST00000480563 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
TTC28-206ENST00000480563 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
TTC28-206ENST00000480563 IFNL1Q8IU54 200 aa14.57□□□□□ -0.08
TTC28-206ENST00000480563 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
TTC28-206ENST00000480563 DEFB129Q9H1M3 183 aa14.57□□□□□ -0.08
TTC28-206ENST00000480563 MAP3K2Q9Y2U5 619 aa14.57□□□□□ -0.08
TTC28-206ENST00000480563 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
TTC28-206ENST00000480563 IGKV5-2P06315 115 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 GNAI1P63096 354 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 GTF2IP78347 998 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 C8orf58Q8NAV2 365 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 ZNF804BA4D1E1 1349 aa14.56□□□□□ -0.08
TTC28-206ENST00000480563 PI4KAP2A4QPH2 592 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
TTC28-206ENST00000480563 ZBTB48P10074 688 aaPredicted RBP14.55□□□□□ -0.08
TTC28-206ENST00000480563 KLRK1P26718 216 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 IGHMBP2P38935 993 aaKnown RBP14.55□□□□□ -0.08
TTC28-206ENST00000480563 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 KSR2Q6VAB6 950 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 PI4KAP1Q8N8J0 262 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 ANKRD2Q9GZV1 360 aa14.55□□□□□ -0.08
TTC28-206ENST00000480563 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
TTC28-206ENST00000480563 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
TTC28-206ENST00000480563 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 DLGAP5Q15398 846 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 MAP3K11Q16584 847 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 ERO1AQ96HE7 468 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 WNK4Q96J92 1243 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 CLMNQ96JQ2 1002 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 PTPN22Q9Y2R2 807 aa14.54□□□□□ -0.08
TTC28-206ENST00000480563 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
TTC28-206ENST00000480563 CD99L2Q8TCZ2 262 aa14.53□□□□□ -0.08
TTC28-206ENST00000480563 UNCXA6NJT0 531 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 H7C1W4 665 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 EN2P19622 333 aaPredicted RBP14.52□□□□□ -0.09
TTC28-206ENST00000480563 SUPT20HL1Q3ZLR7 823 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 OTUD7BQ6GQQ9 843 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 MPHOSPH8Q99549 860 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 CD209Q9NNX6 404 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 PPP2R3BQ9Y5P8 575 aa14.52□□□□□ -0.09
TTC28-206ENST00000480563 COL1A1P02452 1464 aaPredicted RBP14.51□□□□□ -0.09
TTC28-206ENST00000480563 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 APAF1O14727 1248 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 ITGA6P23229 1130 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 KCNJ4P48050 445 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 CRHR2Q13324 411 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 CERS5Q8N5B7 392 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 ARMC5Q96C12 935 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 PCDHAC2Q9Y5I4 1007 aa14.51□□□□□ -0.09
TTC28-206ENST00000480563 CLRN2A0PK11 232 aa14.5□□□□□ -0.09
TTC28-206ENST00000480563 MYO1BO43795 1136 aa14.5□□□□□ -0.09
TTC28-206ENST00000480563 USP2O75604 605 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms