RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
COMMD4-203ENST00000480484 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
COMMD4-203ENST00000480484 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 USP27XA6NNY8 438 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 ATP8B2P98198 1209 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 LSG1Q9H089 658 aaKnown RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 KRT85P78386 507 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 ME3Q16798 604 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 TTC14Q96N46 770 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 GNAI3P08754 354 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 ZNF165P49910 485 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 FBXO38Q6PIJ6 1188 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
COMMD4-203ENST00000480484 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
COMMD4-203ENST00000480484 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 GCP02774 474 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 PTPN14Q15678 1187 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 JAKMIP1Q96N16 626 aaKnown RBP11.87□□□□□ -0.51
COMMD4-203ENST00000480484 RAD50Q92878 1312 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 CREB3O43889 395 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-203ENST00000480484 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
COMMD4-203ENST00000480484 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
COMMD4-203ENST00000480484 GPR37O15354 613 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 TBC1D12O60347 775 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-203ENST00000480484 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 CSB-PGBD3P0DP91 1061 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-203ENST00000480484 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 IPO4Q8TEX9 1081 aaKnown RBP11.86□□□□□ -0.51
COMMD4-203ENST00000480484 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 SGSM2O43147 1006 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
COMMD4-203ENST00000480484 TEFQ10587 303 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
COMMD4-203ENST00000480484 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 SIL1Q9H173 461 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 PPP1R37O75864 691 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 SKILP12757 684 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 RBM6P78332 1123 aaKnown RBP11.85□□□□□ -0.51
COMMD4-203ENST00000480484 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
COMMD4-203ENST00000480484 A0A0G2JLW4 131 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 C9orf131Q5VYM1 1079 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-203ENST00000480484 USTQ9Y2C2 406 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 JAK2O60674 1132 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
COMMD4-203ENST00000480484 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 PARP4Q9UKK3 1724 aaKnown RBP11.84□□□□□ -0.51
COMMD4-203ENST00000480484 KIF4AO95239 1232 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 LRRC8AQ8IWT6 810 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
COMMD4-203ENST00000480484 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.51
COMMD4-203ENST00000480484 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
COMMD4-203ENST00000480484 NR1I2O75469 434 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 BEND3Q5T5X7 828 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 CYP46A1Q9Y6A2 500 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 ADCY9O60503 1353 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 CCDC194A0A1B0GVG4 234 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
COMMD4-203ENST00000480484 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 KDM3BQ7LBC6 1761 aa11.83□□□□□ -0.52
COMMD4-203ENST00000480484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-203ENST00000480484 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
COMMD4-203ENST00000480484 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms