RNA–Protein interactions for RNA: ENST00000479803.1

SCML4-211, Transcript of Scm polycomb group protein like 4, human

TSL 3

Gene SCML4, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCML4-211	ENST00000479803	G2E3	Q7L622	706 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	LRP10	Q7Z4F1	713 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	REM2	Q8IYK8	340 aa	Predicted RBP	13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	TMEM57	Q8N5G2	664 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	R3HDML	Q9H3Y0	253 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	GGA3	Q9NZ52	723 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	COG6	Q9Y2V7	657 aa		13.74	□□□□□ -0.21
SCML4-211	ENST00000479803	DDX58	O95786	925 aa	Known RBP	13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	FKBP5	Q13451	457 aa	Predicted RBP	13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	CLUAP1	Q96AJ1	413 aa		13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	NLRP3	Q96P20	1036 aa		13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	TMX4	Q9H1E5	349 aa	Predicted RBP	13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	DBNDD1	Q9H9R9	158 aa		13.73	□□□□□ -0.21
SCML4-211	ENST00000479803	ZBTB7B	O15156	539 aa	Predicted RBP	13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	KIF4B	Q2VIQ3	1234 aa		13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	SLC10A5	Q5PT55	438 aa		13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	KSR2	Q6VAB6	950 aa		13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	ZBTB40	Q9NUA8	1239 aa		13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	TNN	Q9UQP3	1299 aa		13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	COLQ	Q9Y215	455 aa	Predicted RBP	13.72	□□□□□ -0.21
SCML4-211	ENST00000479803	LAMB1	P07942	1786 aa		13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	BBOX1	O75936	387 aa		13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	NOM1	Q5C9Z4	860 aa	Known RBP	13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	KIF6	Q6ZMV9	814 aa		13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	SULF1	Q8IWU6	871 aa		13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	NECTIN2	Q92692	538 aa		13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	PHAX	Q9H814	394 aa	Known RBP	13.71	□□□□□ -0.21
SCML4-211	ENST00000479803	LAMA3	Q16787	3333 aa		13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	MYL6B	P14649	208 aa		13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	TM4SF4	P48230	202 aa		13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	ITPRIP	Q8IWB1	547 aa		13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	CCDC136	Q96JN2	1154 aa		13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	SCAF8	Q9UPN6	1271 aa	Known RBP	13.7	□□□□□ -0.22
SCML4-211	ENST00000479803	ZNF646	O15015	1829 aa	Predicted RBP	13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	DLL1	O00548	723 aa		13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	ALDH1L1	O75891	902 aa		13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	RPS12	P25398	132 aa	Known RBP	13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	PROSER3	Q2NL68	480 aa		13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	PPP1R42	Q7Z4L9	355 aa		13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	DNAAF4	Q8WXU2	420 aa		13.69	□□□□□ -0.22
SCML4-211	ENST00000479803	PI4KAP2	A4QPH2	592 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	UBE2Q2L	H0YL09	131 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	RIMBP2	O15034	1052 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	FKTN	O75072	461 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	HCLS1	P14317	486 aa	Predicted RBP	13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	EN2	P19622	333 aa	Predicted RBP	13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	GRAP	Q13588	217 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	ANGEL2	Q5VTE6	544 aa	Known RBP	13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	ANKRD13D	Q6ZTN6	518 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	COPS6	Q7L5N1	327 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	PI4KAP1	Q8N8J0	262 aa		13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	GRAPL	Q8TC17	118 aa	Predicted RBP	13.68	□□□□□ -0.22
SCML4-211	ENST00000479803	ECE2	O60344	883 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	FKBP1B	P68106	108 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	MKRN3	Q13064	507 aa	Known RBP	13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	DOK7	Q18PE1	504 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	WASHC4	Q2M389	1173 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	PARP10	Q53GL7	1025 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	BEND3	Q5T5X7	828 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	PLBD2	Q8NHP8	589 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	XAGE3	Q8WTP9	111 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	UTP14A	Q9BVJ6	771 aa	Known RBP	13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	CFHR5	Q9BXR6	569 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	POLL	Q9UGP5	575 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803	HDAC5	Q9UQL6	1122 aa		13.67	□□□□□ -0.22
SCML4-211	ENST00000479803		F6X3S4	739 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	ANXA1	P04083	346 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	GNAI3	P08754	354 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	SCARF1	Q14162	830 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	PRAMEF18	Q5VWM3	479 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	LINS1	Q8NG48	757 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	METTL22	Q9BUU2	404 aa	Predicted RBP	13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	SRCIN1	Q9C0H9	1055 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	MAP3K2	Q9Y2U5	619 aa		13.66	□□□□□ -0.22
SCML4-211	ENST00000479803	VIL1	P09327	827 aa	Known RBP	13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	HDAC1	Q13547	482 aa	Predicted RBP	13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	DDX46	Q7L014	1031 aa	Known RBP	13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	OTOP1	Q7RTM1	612 aa		13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	RIC3	Q7Z5B4	369 aa		13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	OTUD5	Q96G74	571 aa		13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	TRIM17	Q9Y577	477 aa		13.65	□□□□□ -0.22
SCML4-211	ENST00000479803	ZNF280A	P59817	542 aa	Predicted RBP	13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	GPSM2	P81274	684 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	CAP1	Q01518	475 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	NEXN	Q0ZGT2	675 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	B4GALNT3	Q6L9W6	998 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	SLC4A10	Q6U841	1118 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	RWDD1	Q9H446	243 aa	Predicted RBP	13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	UNC80	Q8N2C7	3258 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	ZNF609	O15014	1411 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	UTY	O14607	1347 aa		13.64	□□□□□ -0.23
SCML4-211	ENST00000479803	TRIM28	Q13263	835 aa	Known RBP	13.63	□□□□□ -0.23
SCML4-211	ENST00000479803	NLRP10	Q86W26	655 aa		13.63	□□□□□ -0.23
SCML4-211	ENST00000479803	CELF1	Q92879	486 aa	Known RBP	13.63	□□□□□ -0.23
SCML4-211	ENST00000479803	USP44	Q9H0E7	712 aa		13.63	□□□□□ -0.23
SCML4-211	ENST00000479803	PCDHB15	Q9Y5E8	787 aa		13.63	□□□□□ -0.23

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