RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
CLDN18-203ENST00000479660 UPF3BQ9BZI7 483 aaKnown RBP17.33■□□□□ 0.36
CLDN18-203ENST00000479660 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
CLDN18-203ENST00000479660 TAF1P21675 1872 aa17.33■□□□□ 0.36
CLDN18-203ENST00000479660 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
CLDN18-203ENST00000479660 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
CLDN18-203ENST00000479660 TM4SF1P30408 202 aa17.32■□□□□ 0.36
CLDN18-203ENST00000479660 ZNF827Q17R98 1081 aa17.32■□□□□ 0.36
CLDN18-203ENST00000479660 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
CLDN18-203ENST00000479660 KCNB2Q92953 911 aa17.32■□□□□ 0.36
CLDN18-203ENST00000479660 SERPINB2P05120 415 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 ZFYP08048 801 aaPredicted RBP17.31■□□□□ 0.36
CLDN18-203ENST00000479660 MCM2P49736 904 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 TTF1Q15361 905 aaPredicted RBP17.31■□□□□ 0.36
CLDN18-203ENST00000479660 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
CLDN18-203ENST00000479660 NBR1Q14596 966 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
CLDN18-203ENST00000479660 BCAMP50895 628 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 SLC27A2O14975 620 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 ST5P78524 1137 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLDN18-203ENST00000479660 HMG20BQ9P0W2 317 aa17.3■□□□□ 0.36
CLDN18-203ENST00000479660 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
CLDN18-203ENST00000479660 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
CLDN18-203ENST00000479660 MAST3O60307 1309 aa17.29■□□□□ 0.36
CLDN18-203ENST00000479660 CASTP20810 708 aaKnown RBP17.28■□□□□ 0.36
CLDN18-203ENST00000479660 RASGRF1Q13972 1273 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 ZSCAN25Q6NSZ9 544 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
CLDN18-203ENST00000479660 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 DDR1Q08345 913 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 ADCK5Q3MIX3 580 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
CLDN18-203ENST00000479660 TM6SF1Q9BZW5 370 aa17.28■□□□□ 0.36
CLDN18-203ENST00000479660 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
CLDN18-203ENST00000479660 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
CLDN18-203ENST00000479660 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
CLDN18-203ENST00000479660 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
CLDN18-203ENST00000479660 M0R2C6 588 aa17.27■□□□□ 0.36
CLDN18-203ENST00000479660 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
CLDN18-203ENST00000479660 IDH1O75874 414 aaKnown RBP17.27■□□□□ 0.36
CLDN18-203ENST00000479660 DDIT3P35638 169 aa17.27■□□□□ 0.36
CLDN18-203ENST00000479660 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
CLDN18-203ENST00000479660 APPBP2Q92624 585 aa17.27■□□□□ 0.36
CLDN18-203ENST00000479660 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
CLDN18-203ENST00000479660 GRAPQ13588 217 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 NLGN1Q8N2Q7 840 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
CLDN18-203ENST00000479660 TMX3Q96JJ7 454 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
CLDN18-203ENST00000479660 GYG1P46976 350 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
CLDN18-203ENST00000479660 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
CLDN18-203ENST00000479660 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
CLDN18-203ENST00000479660 PSMA5P28066 241 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 ADD2P35612 726 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 TSGA10IPQ3SY00 556 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 TTC14Q96N46 770 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 PUS7LQ9H0K6 701 aaKnown RBP17.25■□□□□ 0.35
CLDN18-203ENST00000479660 GNL3LQ9NVN8 582 aaKnown RBP17.25■□□□□ 0.35
CLDN18-203ENST00000479660 CYP46A1Q9Y6A2 500 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 CPA1P15085 419 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 UBE3CQ15386 1083 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 CRY2Q49AN0 593 aa17.25■□□□□ 0.35
CLDN18-203ENST00000479660 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
CLDN18-203ENST00000479660 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
CLDN18-203ENST00000479660 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
CLDN18-203ENST00000479660 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
CLDN18-203ENST00000479660 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
CLDN18-203ENST00000479660 A0A1B0GUL6 1792 aa17.24■□□□□ 0.35
CLDN18-203ENST00000479660 AK2P54819 239 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 MAP3K12Q12852 859 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
CLDN18-203ENST00000479660 TAF6LQ9Y6J9 622 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 MYH7P12883 1935 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 RPAP1Q9BWH6 1393 aaPredicted RBP17.23■□□□□ 0.35
CLDN18-203ENST00000479660 CYP21A2P08686 494 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 PDE6AP16499 860 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 KRT32Q14532 448 aa17.23■□□□□ 0.35
CLDN18-203ENST00000479660 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
CLDN18-203ENST00000479660 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
CLDN18-203ENST00000479660 GPAA1O43292 621 aa17.22■□□□□ 0.35
CLDN18-203ENST00000479660 EN1Q05925 392 aaPredicted RBP17.22■□□□□ 0.35
CLDN18-203ENST00000479660 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms