RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 TAF7LQ5H9L4 462 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 C15orf52Q6ZUT6 534 aaKnown RBP13.25□□□□□ -0.29
SP140-210ENST00000479539 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 PGAP2Q9UHJ9 254 aa13.25□□□□□ -0.29
SP140-210ENST00000479539 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 TAF5LO75529 589 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
SP140-210ENST00000479539 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
SP140-210ENST00000479539 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
SP140-210ENST00000479539 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
SP140-210ENST00000479539 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
SP140-210ENST00000479539 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
SP140-210ENST00000479539 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 SNAP23O00161 211 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 KLRK1P26718 216 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 KCNJ4P48050 445 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 TRPM4Q8TD43 1214 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 GMLQ99445 158 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
SP140-210ENST00000479539 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 SCN4AP35499 1836 aa13.23□□□□□ -0.29
SP140-210ENST00000479539 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
SP140-210ENST00000479539 TRIM27P14373 513 aa13.22□□□□□ -0.29
SP140-210ENST00000479539 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
SP140-210ENST00000479539 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
SP140-210ENST00000479539 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
SP140-210ENST00000479539 ZNF609O15014 1411 aa13.22□□□□□ -0.29
SP140-210ENST00000479539 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
SP140-210ENST00000479539 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.29
SP140-210ENST00000479539 DACT2Q5SW24 774 aa13.21□□□□□ -0.29
SP140-210ENST00000479539 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
SP140-210ENST00000479539 CD209Q9NNX6 404 aa13.21□□□□□ -0.29
SP140-210ENST00000479539 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 TMEM88BA6NKF7 163 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 PLIN1O60240 522 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 EGFRP00533 1210 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
SP140-210ENST00000479539 LRRC24Q50LG9 513 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
SP140-210ENST00000479539 MEIS3Q99687 375 aa13.2□□□□□ -0.3
SP140-210ENST00000479539 GNAI3P08754 354 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 IL1R1P14778 569 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 MMP14P50281 582 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 PTPN12Q05209 780 aaKnown RBP13.19□□□□□ -0.3
SP140-210ENST00000479539 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
SP140-210ENST00000479539 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 EYA2O00167 538 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 TRAF5O00463 557 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 GTF2IP78347 998 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
SP140-210ENST00000479539 RBM26Q5T8P6 1007 aaKnown RBP13.18□□□□□ -0.3
SP140-210ENST00000479539 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
SP140-210ENST00000479539 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
SP140-210ENST00000479539 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
SP140-210ENST00000479539 PDE8BO95263 885 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 KIF4BQ2VIQ3 1234 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 CST9Q5W186 159 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 GLIS2Q9BZE0 524 aaPredicted RBP13.17□□□□□ -0.3
SP140-210ENST00000479539 MYOZ2Q9NPC6 264 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
SP140-210ENST00000479539 SASH1O94885 1247 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 FGFR2P21802 821 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
SP140-210ENST00000479539 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
SP140-210ENST00000479539 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
SP140-210ENST00000479539 MYH3P11055 1940 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 CIAO1O76071 339 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 GYG1P46976 350 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
SP140-210ENST00000479539 MTX1Q13505 466 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 SCARF1Q14162 830 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
SP140-210ENST00000479539 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
SP140-210ENST00000479539 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms