RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 CEP152O94986 1710 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 TNNT1P13805 278 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 C16orf45Q96MC5 204 aaPredicted RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 ATP5JP18859 108 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 ZHX3Q9H4I2 956 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 BMP2KQ9NSY1 1161 aaPredicted RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 NEMFO60524 1076 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SYKP43405 635 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 RTN1Q16799 776 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
COL20A1-206ENST00000479501 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
COL20A1-206ENST00000479501 SSH2Q76I76 1423 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 BAG3O95817 575 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 ITGA6P23229 1130 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 KIF5BP33176 963 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 RFC4P35249 363 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
COL20A1-206ENST00000479501 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.24
COL20A1-206ENST00000479501 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
COL20A1-206ENST00000479501 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.23
COL20A1-206ENST00000479501 XAGE2Q96GT9 111 aa16.52■□□□□ 0.23
COL20A1-206ENST00000479501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.23
COL20A1-206ENST00000479501 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
COL20A1-206ENST00000479501 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 KIAA0754O94854 1291 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 BRD1O95696 1058 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 TYRO3Q06418 890 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
COL20A1-206ENST00000479501 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 ZNF830Q96NB3 372 aaPredicted RBP16.51■□□□□ 0.23
COL20A1-206ENST00000479501 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
COL20A1-206ENST00000479501 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 GSDMDP57764 484 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 MAGEB6Q8N7X4 407 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
COL20A1-206ENST00000479501 MED14O60244 1454 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 SPTLC2O15270 562 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 DTNBO60941 627 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 FAM173BQ6P4H8 233 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 APPBP2Q92624 585 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 GNAT2P19087 354 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 MARCKSP29966 332 aaPredicted RBP16.5■□□□□ 0.23
COL20A1-206ENST00000479501 ZNF445P59923 1031 aa16.5■□□□□ 0.23
COL20A1-206ENST00000479501 TOM1O60784 492 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 PTH1RQ03431 593 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 TRERF1Q96PN7 1200 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
COL20A1-206ENST00000479501 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
COL20A1-206ENST00000479501 HS1BP3Q53T59 392 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 TRMT1Q9NXH9 659 aaKnown RBP16.49■□□□□ 0.23
COL20A1-206ENST00000479501 TMC6Q7Z403 805 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
COL20A1-206ENST00000479501 CALRP27797 417 aaKnown RBP16.49■□□□□ 0.23
COL20A1-206ENST00000479501 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
COL20A1-206ENST00000479501 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
COL20A1-206ENST00000479501 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 CRACR2BQ8N4Y2 399 aaPredicted RBP16.48■□□□□ 0.23
COL20A1-206ENST00000479501 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 PDE8AO60658 829 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 USP8P40818 1118 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 CCDC186Q7Z3E2 898 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
COL20A1-206ENST00000479501 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
COL20A1-206ENST00000479501 PKP1Q13835 747 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 STX8Q9UNK0 236 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
COL20A1-206ENST00000479501 NPHP4O75161 1426 aaPredicted RBP16.47■□□□□ 0.23
COL20A1-206ENST00000479501 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
COL20A1-206ENST00000479501 ERBB3P21860 1342 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms