RNA–Protein interactions for RNA: ENST00000479459.1

EPHA1-204, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-204ENST00000479459 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 PTPN18Q99952 460 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 STXBP5LQ9Y2K9 1186 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 A0A1W2PPC1 479 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
EPHA1-204ENST00000479459 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
EPHA1-204ENST00000479459 DEFB123Q8N688 67 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 SLC10A4Q96EP9 437 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 CLMNQ96JQ2 1002 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 UNC80Q8N2C7 3258 aa17.4■□□□□ 0.38
EPHA1-204ENST00000479459 WTIPA6NIX2 430 aaPredicted RBP17.39■□□□□ 0.37
EPHA1-204ENST00000479459 GJA5P36382 358 aa17.39■□□□□ 0.37
EPHA1-204ENST00000479459 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
EPHA1-204ENST00000479459 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
EPHA1-204ENST00000479459 EIF2S2P20042 333 aaKnown RBP17.38■□□□□ 0.37
EPHA1-204ENST00000479459 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
EPHA1-204ENST00000479459 UBE2Q1Q7Z7E8 422 aa17.38■□□□□ 0.37
EPHA1-204ENST00000479459 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
EPHA1-204ENST00000479459 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
EPHA1-204ENST00000479459 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
EPHA1-204ENST00000479459 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
EPHA1-204ENST00000479459 APOBEC3FQ8IUX4 373 aaKnown RBP17.37■□□□□ 0.37
EPHA1-204ENST00000479459 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
EPHA1-204ENST00000479459 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
EPHA1-204ENST00000479459 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
EPHA1-204ENST00000479459 NR2E3Q9Y5X4 410 aa17.37■□□□□ 0.37
EPHA1-204ENST00000479459 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
EPHA1-204ENST00000479459 UNCXA6NJT0 531 aa17.36■□□□□ 0.37
EPHA1-204ENST00000479459 SASH1O94885 1247 aa17.36■□□□□ 0.37
EPHA1-204ENST00000479459 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
EPHA1-204ENST00000479459 COL9A1P20849 921 aa17.35■□□□□ 0.37
EPHA1-204ENST00000479459 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
EPHA1-204ENST00000479459 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
EPHA1-204ENST00000479459 SH3TC2Q8TF17 1288 aa17.35■□□□□ 0.37
EPHA1-204ENST00000479459 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
EPHA1-204ENST00000479459 MMP14P50281 582 aa17.34■□□□□ 0.37
EPHA1-204ENST00000479459 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
EPHA1-204ENST00000479459 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
EPHA1-204ENST00000479459 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
EPHA1-204ENST00000479459 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
EPHA1-204ENST00000479459 Q7L0L9 218 aa17.33■□□□□ 0.36
EPHA1-204ENST00000479459 DEFB129Q9H1M3 183 aa17.33■□□□□ 0.36
EPHA1-204ENST00000479459 XDHP47989 1333 aa17.32■□□□□ 0.36
EPHA1-204ENST00000479459 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
EPHA1-204ENST00000479459 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
EPHA1-204ENST00000479459 STRIP1Q5VSL9 837 aa17.32■□□□□ 0.36
EPHA1-204ENST00000479459 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
EPHA1-204ENST00000479459 MS4A4AQ96JQ5 239 aa17.32■□□□□ 0.36
EPHA1-204ENST00000479459 PPP1R12BO60237 982 aaPredicted RBP17.31■□□□□ 0.36
EPHA1-204ENST00000479459 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
EPHA1-204ENST00000479459 RTL5Q5HYW3 569 aaPredicted RBP17.31■□□□□ 0.36
EPHA1-204ENST00000479459 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
EPHA1-204ENST00000479459 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
EPHA1-204ENST00000479459 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
EPHA1-204ENST00000479459 VCANP13611 3396 aa17.31■□□□□ 0.36
EPHA1-204ENST00000479459 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
EPHA1-204ENST00000479459 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
EPHA1-204ENST00000479459 MTFR1Q15390 333 aa17.3■□□□□ 0.36
EPHA1-204ENST00000479459 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
EPHA1-204ENST00000479459 MTMR10Q9NXD2 777 aa17.3■□□□□ 0.36
EPHA1-204ENST00000479459 TTC28Q96AY4 2481 aa17.3■□□□□ 0.36
EPHA1-204ENST00000479459 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
EPHA1-204ENST00000479459 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
EPHA1-204ENST00000479459 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
EPHA1-204ENST00000479459 ARHGAP39Q9C0H5 1083 aa17.29■□□□□ 0.36
EPHA1-204ENST00000479459 SPTBN5Q9NRC6 3674 aaKnown RBP17.28■□□□□ 0.36
EPHA1-204ENST00000479459 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
EPHA1-204ENST00000479459 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
EPHA1-204ENST00000479459 PPP2R3BQ9Y5P8 575 aa17.28■□□□□ 0.36
EPHA1-204ENST00000479459 GJA8P48165 433 aa17.27■□□□□ 0.36
EPHA1-204ENST00000479459 ZFYVE28Q9HCC9 887 aa17.27■□□□□ 0.36
EPHA1-204ENST00000479459 ZNF804BA4D1E1 1349 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 TAF1CQ15572 869 aaPredicted RBP17.26■□□□□ 0.35
EPHA1-204ENST00000479459 NBPF12Q5TAG4 269 aaPredicted RBP17.26■□□□□ 0.35
EPHA1-204ENST00000479459 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 NKX2-3Q8TAU0 364 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 COA1Q9GZY4 146 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 ZSWIM8A7E2V4 1837 aa17.26■□□□□ 0.35
EPHA1-204ENST00000479459 GJB1P08034 283 aa17.25■□□□□ 0.35
EPHA1-204ENST00000479459 IREB2P48200 963 aaKnown RBP17.25■□□□□ 0.35
EPHA1-204ENST00000479459 LACTBP83111 547 aaPredicted RBP17.25■□□□□ 0.35
EPHA1-204ENST00000479459 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
EPHA1-204ENST00000479459 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
EPHA1-204ENST00000479459 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
EPHA1-204ENST00000479459 OPTNQ96CV9 577 aa17.25■□□□□ 0.35
EPHA1-204ENST00000479459 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
EPHA1-204ENST00000479459 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
EPHA1-204ENST00000479459 GNRH1P01148 92 aa17.24■□□□□ 0.35
EPHA1-204ENST00000479459 PRMT2P55345 433 aa17.24■□□□□ 0.35
EPHA1-204ENST00000479459 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
EPHA1-204ENST00000479459 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
EPHA1-204ENST00000479459 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms