RNA–Protein interactions for RNA: ENST00000479210.1

GLI3-206, Transcript of GLI family zinc finger 3, humanhuman

TSL 2

Gene GLI3, Length 4,968 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-206ENST00000479210 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.22
GLI3-206ENST00000479210 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
GLI3-206ENST00000479210 CLCN1P35523 988 aa16.39■□□□□ 0.21
GLI3-206ENST00000479210 DCAF5Q96JK2 942 aa16.39■□□□□ 0.21
GLI3-206ENST00000479210 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
GLI3-206ENST00000479210 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
GLI3-206ENST00000479210 DHX58Q96C10 678 aa16.39■□□□□ 0.21
GLI3-206ENST00000479210 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.39■□□□□ 0.21
GLI3-206ENST00000479210 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
GLI3-206ENST00000479210 HOXC9P31274 260 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 DDB1Q16531 1140 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 CTNNA2P26232 953 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
GLI3-206ENST00000479210 RUFY3Q7L099 469 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 HOOK3Q86VS8 718 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 ERMNQ8TAM6 284 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
GLI3-206ENST00000479210 ZKSCAN5Q9Y2L8 839 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 PSMA7O14818 248 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 EHBP1Q8NDI1 1231 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 DNAI2Q9GZS0 605 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
GLI3-206ENST00000479210 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 RNMTO43148 476 aaKnown RBP16.38■□□□□ 0.21
GLI3-206ENST00000479210 CPA1P15085 419 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
GLI3-206ENST00000479210 ABCC1P33527 1531 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 NAPAP54920 295 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 SYT1P21579 422 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 ASIC1P78348 528 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
GLI3-206ENST00000479210 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
GLI3-206ENST00000479210 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
GLI3-206ENST00000479210 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
GLI3-206ENST00000479210 CCDC91Q7Z6B0 441 aa16.37■□□□□ 0.21
GLI3-206ENST00000479210 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
GLI3-206ENST00000479210 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 IP6K1Q92551 441 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 KCNA6P17658 529 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 GNAT2P19087 354 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 PICALMQ13492 652 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 RAD50Q92878 1312 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
GLI3-206ENST00000479210 MYZAPP0CAP1 466 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 RXRAP19793 462 aa16.36■□□□□ 0.21
GLI3-206ENST00000479210 CALRP27797 417 aaKnown RBP16.36■□□□□ 0.21
GLI3-206ENST00000479210 PTGS1P23219 599 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 TIMM10P62072 90 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
GLI3-206ENST00000479210 CALM1P0DP23 149 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 CALM2P0DP24 149 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 CALM3P0DP25 149 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 CALML3P27482 149 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
GLI3-206ENST00000479210 PUF60Q9UHX1 559 aaKnown RBP16.35■□□□□ 0.21
GLI3-206ENST00000479210 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
GLI3-206ENST00000479210 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
GLI3-206ENST00000479210 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
GLI3-206ENST00000479210 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
GLI3-206ENST00000479210 RNF187Q5TA31 235 aaPredicted RBP16.34■□□□□ 0.21
GLI3-206ENST00000479210 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
GLI3-206ENST00000479210 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
GLI3-206ENST00000479210 GOLGA6L10A0A0M3HER8 536 aa16.33■□□□□ 0.21
GLI3-206ENST00000479210 STX17P56962 302 aa16.33■□□□□ 0.21
GLI3-206ENST00000479210 C6orf50Q9HD87 102 aa16.33■□□□□ 0.21
GLI3-206ENST00000479210 WDR7Q9Y4E6 1490 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
GLI3-206ENST00000479210 TRAF1Q13077 416 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 CTAGE15A4D2H0 777 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 CTAGE8P0CG41 777 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 IL13P35225 146 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 LMAN1P49257 510 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.2
GLI3-206ENST00000479210 BRAPQ7Z569 592 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 CTAGE6Q86UF2 777 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 ZNF804AQ7Z570 1209 aa16.33■□□□□ 0.2
GLI3-206ENST00000479210 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 ABCC10Q5T3U5 1492 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 CCDC175P0C221 793 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 BICD1Q96G01 975 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 UBE4AQ14139 1066 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 ARFGAP3Q9NP61 516 aa16.32■□□□□ 0.2
GLI3-206ENST00000479210 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
GLI3-206ENST00000479210 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
GLI3-206ENST00000479210 CKAP4Q07065 602 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms