RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 PIK3C2AO00443 1686 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 TDO2P48775 406 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 SCRN1Q12765 414 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 TFCP2Q12800 502 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 CCAR1Q8IX12 1150 aaKnown RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 CWC15Q9P013 229 aaKnown RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 RGPD8O14715 1765 aaPredicted RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 CYP21A2P08686 494 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 RESTQ13127 1097 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 PAXBP1Q9Y5B6 917 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 COL15A1P39059 1388 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 ATP5J2-PTCD1G3V325 749 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 LCMT1Q9UIC8 334 aa12.87□□□□□ -0.35
LRRFIP1-211ENST00000478958 ME1P48163 572 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 DBNDD2Q9BQY9 259 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 SKILP12757 684 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 NBPF20Q3BBV1 942 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
LRRFIP1-211ENST00000478958 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 FBXO38Q6PIJ6 1188 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 MED23Q9ULK4 1368 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 CCDC73Q6ZRK6 1079 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 SUFUQ9UMX1 484 aa12.85□□□□□ -0.35
LRRFIP1-211ENST00000478958 KIF1CO43896 1103 aaKnown RBP12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 OTUD7BQ6GQQ9 843 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 DDX21Q9NR30 783 aaKnown RBP eCLIP12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 GCKRQ14397 625 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 KRT32Q14532 448 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 IQCB1Q15051 598 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 MNS1Q8NEH6 495 aa12.84□□□□□ -0.35
LRRFIP1-211ENST00000478958 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 CCDC69A6NI79 296 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 IRF6O14896 467 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 ATP2B1P20020 1258 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 PTPN14Q15678 1187 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 ZSCAN26Q16670 478 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 TNNI3KQ59H18 835 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 TICAM2Q86XR7 235 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 FSIP1Q8NA03 581 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 SDF4Q9BRK5 362 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 ZNF215Q9UL58 517 aaPredicted RBP12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.35
LRRFIP1-211ENST00000478958 PXDNQ92626 1479 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 PDIA6Q15084 440 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 UBR1Q8IWV7 1749 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 BIN1O00499 593 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 STX1AQ16623 288 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
LRRFIP1-211ENST00000478958 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 GCP02774 474 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 GPS2Q13227 327 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 SRLQ86TD4 932 aa12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 THEMISQ8N1K5 641 aaPredicted RBP12.82□□□□□ -0.36
LRRFIP1-211ENST00000478958 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms